Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0318 ATGACAACGAATCCACCCTCCTCCCTTCTTCCCTTCGCCTTCTCCTTCATCCTCATCGTTTTCCTCTCTCCTCCATTCCCAATCGCCGTCGACGGCCTCGGTTCTGCCTCCACCACCGCCATCACCTACGGCACCGGCGCCGTCTGCGGCATTCTTGCCGGCGAGTCCACCCAGAGGATCCAATGCTACCAAAACGGCCAAACTCTCCAAGTCCTCCCCAACGTCTCCTTCCAAGCCATCTCCGGCGGCCGGAGTTTCTTCTGCGGCCTCCGGTCCGGGGGGTTCACCCTCCATTGTTGGGACACCACAGATTCAAACAACTCAACGCTTCTGCCAAAACGTTTGTACTACAGCCCCACCGTCCAATTGACCGATCTATCGGTCGGAGATTCCCAGGTTTGTGCTAGAGAGGTGGATTCCGGTACCGTCAGGTGCTGGAGAGGAACAGACAGAAACGGGAACGAGTTTTCTTCGCCTAAGGAGTATCTTCGGTTTCGTGGGGTCACTTCTGGAAGTGGGTTTTCTTGTGGGATTTTGAGGCAAAACTACAGCGTTCAATGTTGGGGTCAGAGAGGAAGCACTGGGGTTGAAATTCAGAGACAGTTTAGGAATCTTTCGATGTCAAGCTTAGTTGCAGGGGAATCTCATGTTTGCGGTTTGACCATCAATGGGGCTTTAGCATGCAAAGGAAACAATAATTCTGGGCAATTGAATGTTCCTTTGGGTTCATCATCTTCTTCTTCAGAGTTCTCAGGTCTCGCATTGGGAGCGAATTTCACTTGTGCTATCAGAAGCAGGAACGGTCTGGTCGTGTGCTGGGGACAAATAACCAACGCGATCCAGAATGTTTCATTCGAGTCAATCGTTGCTGGTTTGGACTACGTTTGTGGGTTAACGACAGGAAACTTGTCTGTAAACTGCTGGGGACCTGGTTGGTCTTCAACAAATAATCTTGTTCTTCCATTGGGAATGGTAATCCCAGGTCCTTGTGTTGAAGATTCTTGTAGTTCTTGTGGTACGTATCCGAATTCCGAGGTTCTGTGTGATGGGTCTGGAAGCATATGTTATTCGTGCCAGACACAGAATCCACTTGCTGTACCGATACCACTAACCCCACCACCATCACCATCACCGTCATCATCATCTGAACCAAATTCTAAAGATAGTAACAGAACAGAATTGTTGGCGTTTCTGATTGTGGGATCAATCGGTGCTTTTGTGGGTCTCTGTTCAATTCTGTACTGCTTATGGGTTCTAACACGTCGTTTATTAAACCCCAAAGTCGACAATTCTGTACAACCCACACCCACAGAGCCCAATGGGGACGATGTTTTTCCCACCGTTTCTACCACAGACACGACCGTAAGATCATTCTCCAGCAAACGACAGAGTTCGCGGACAATAAGGAGCAGCCACAGAAGAAGCGGGTCGTCCTCGAAACTCGTGGACAAGGCAGAAAGCTTCACCTTCTCCGAACTCTCAGCCGCCACAGACAACTTCTCAGCACACCACAAAATCGGCGCAGGAAGCTTCAGCGTCGTCTACAGAGGCAAGCTTCAAGACGGGCGTGAAGTGGCCATCAAGAGAGGAGAAACCAGCGCGAAGAAGAAGAAGTTCCAAGAAATAGAAACCGCATTCGATTCGGAACTGGCACTACTATCCAGGCTTCACCACAAACACCTGCTGTTGACGGGGAAGAAGGCGGTGTTCAGAGAGGGGGAGGGAGATCCGGTGGGCGTGGTGGAGTATGCGGGGCGGAGGATCGCCGGAGGGGAGCTGTGGAGCGTTTTGGATTACAGAGTGGGAGAGGCAGGGGTGAACGAGAGTGAAGGAGTGGAGATAATGGCGTACACAGCGATGCAGTGTGTGAGTCTGGAAGGGAAGGGGAGGCCGAGTGCGAGTGATGTCGTGGGGAATCTGGAGAGGGCCTTGGCCTTCGTTGAAGGCAGCCCAGCCACCGGAAGCTTCTCTGCTCCTCCGTTTTCTTCCTCTGCACCTTTCGACTGA 2007 0.5172 MTTNPPSSLLPFAFSFILIVFLSPPFPIAVDGLGSASTTAITYGTGAVCGILAGESTQRIQCYQNGQTLQVLPNVSFQAISGGRSFFCGLRSGGFTLHCWDTTDSNNSTLLPKRLYYSPTVQLTDLSVGDSQVCAREVDSGTVRCWRGTDRNGNEFSSPKEYLRFRGVTSGSGFSCGILRQNYSVQCWGQRGSTGVEIQRQFRNLSMSSLVAGESHVCGLTINGALACKGNNNSGQLNVPLGSSSSSSEFSGLALGANFTCAIRSRNGLVVCWGQITNAIQNVSFESIVAGLDYVCGLTTGNLSVNCWGPGWSSTNNLVLPLGMVIPGPCVEDSCSSCGTYPNSEVLCDGSGSICYSCQTQNPLAVPIPLTPPPSPSPSSSSEPNSKDSNRTELLAFLIVGSIGAFVGLCSILYCLWVLTRRLLNPKVDNSVQPTPTEPNGDDVFPTVSTTDTTVRSFSSKRQSSRTIRSSHRRSGSSSKLVDKAESFTFSELSAATDNFSAHHKIGAGSFSVVYRGKLQDGREVAIKRGETSAKKKKFQEIETAFDSELALLSRLHHKHLLLTGKKAVFREGEGDPVGVVEYAGRRIAGGELWSVLDYRVGEAGVNESEGVEIMAYTAMQCVSLEGKGRPSASDVVGNLERALAFVEGSPATGSFSAPPFSSSAPFD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0318 668 ProSiteProfiles Protein kinase domain profile. 500 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0318 668 SUPERFAMILY RCC1/BLIP-II 33 274 IPR009091 -
Bisa09g0318 668 MobiDBLite consensus disorder prediction 367 388 - -
Bisa09g0318 668 ProSitePatterns Protein kinases ATP-binding region signature. 506 536 IPR017441 GO:0005524
Bisa09g0318 668 Gene3D - 164 367 IPR009091 -
Bisa09g0318 668 SUPERFAMILY Protein kinase-like (PK-like) 476 562 IPR011009 -
Bisa09g0318 668 MobiDBLite consensus disorder prediction 455 479 - -
Bisa09g0318 668 Gene3D - 23 162 IPR009091 -
Bisa09g0318 668 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 562 650 IPR044815 GO:0004674
Bisa09g0318 668 Gene3D Phosphorylase Kinase; domain 1 471 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0318 Bisa-ChrBisa09 4510141 4512579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0318 564 644 Receptor kinase-like Gene Family AT3G55950 50.000 3.99e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bisa09g0318 PK_Tyr_Ser-Thr 3.8e-05 CL0016