Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0314 ATGTCACTTGTTCCAAGTCCAACCAATCGAATTCAACAGAATTGTTACGTGTCGCACAGTCATTGGTTTGGATCTCCTTATATAACAAGGATCGGCAGATTCCCAAACTCACTCGCGGAATTTGTCGGCGAAACTGAGTGTGGAAGAAGCAAAGGGATGGCGAAAACGACGTCGTTGCTGCTCTGGACGCTGGTCCTCTTCGGAACCCTTGCTATCATCCAGGCGAAGAAGTCGAAGGAGAATTTGAAAGAAGTGACACACAAGGTTTATTTTGACGTTGAGATTGATGGAAAGCCGGCCGGTCGTGTCGTAATGGGTCTTTTTGGGAAGACAGTTCCAAAAACTGCAGAAAACTTTCGAGCTCTTTGCACAGGGGAGAAAGGAACTGGGAAAAGTGGAAAGCCCCTCCATTACAAGGGTAGCGCATTCCACAGGATTATACCTAGCTTTATGATCCAAGGAGGTGATTTTACCCATGGCAACGGAATGGGAGGAGAATCAATCTACGGAGAGAAGTTTGCTGATGAGAACTTCAAGATAAAACATACTGGACCAGGACTTTTATCAATGGCAAACGCTGGCCCTGATACCAATGGTTCACAGTTCTTCATTACGACTGTGACAACTAGCTGGTTGGATGGAAGGCACGTTGTGTTTGGAAAAGTGCTTTCTGGAATGGATGTGGTTTACAAGATGGAAGCTGAAGGAAAGCAAAGTGGCACTCCCAAGAGTAAGGTCGTAATTGCCGATAGCGGGGAACTCCCCCTGTAA 771 0.4643 MSLVPSPTNRIQQNCYVSHSHWFGSPYITRIGRFPNSLAEFVGETECGRSKGMAKTTSLLLWTLVLFGTLAIIQAKKSKENLKEVTHKVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKPLHYKGSAFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKIKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKMEAEGKQSGTPKSKVVIADSGELPL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0314 256 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 88 254 - -
Bisa09g0314 256 FunFam Peptidyl-prolyl cis-trans isomerase 82 255 - -
Bisa09g0314 256 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 138 155 IPR020892 GO:0003755|GO:0006457
Bisa09g0314 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 143 155 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 201 213 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 214 229 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 90 253 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 CDD cyclophilin_ABH_like 87 252 - -
Bisa09g0314 256 Gene3D - 74 255 IPR029000 -
Bisa09g0314 256 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 91 250 IPR002130 GO:0000413|GO:0003755
Bisa09g0314 256 SUPERFAMILY Cyclophilin-like 84 254 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0314 Bisa-ChrBisa09 4457991 4460426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0314 101 233 U-box Gene Family AT5G67530 47.015 3.80e-28 110