Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0302 ATGGAGGCTTCATGGGAAGAAAGTGTCACGTCCTCCATCAACACAATCTACCTTCTCTTCTCAGCCTACCTCGTCTTCGTTATGCAAATTGGCTTTGCTATGCTATGTGCAGGCTCTGTTAGGGCCAAGAACGCCATGAACATAATGCTCACCAACGTCGTCGACGCCGTTGTCGGAAGCATATCCTTCTACCTTTTCGGCTTCGCATTTGCCTTCGGCGATGGCTCTCACTCCAATCCCTTCATCGGTACTGATTTATTCGCTCTCGCTACTATTCCTAATGGAACTTACGATTATAGCTTCTTTATGTTTCAATGGGCTTTCGCCATAGCCGTAGCAGGTATTACAAGTGGGTCCATAGCTGAACGAACCCAGTTCAGTGCTTACCTTGTTTTTTCTTTCTTCCTTACTGGGTTTGTGTATCCTGTTGTGGTCCATTGGGTTTGGTCCTCCAACGGTTGGCTCAGTCCCAGTTCGAGCCAGTTGTTTCTAGGCTCGGGTGCGATTGACTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAATTGCTGGGCTTTGGGGATCTCTAGTGGAAGGCCCACGGGTTGGCCGGTTTGATGCGTTTGGCAAGCCCGTGCCACTTCGAGGCCACAATGCGAGTCTTGTGGTACTTGGGACATTTCTTTTGTGGTTTGGATGGTTTGGGTTCAATCCGGGCTCTTTTGATAAGATTCTTGTGGCATACCCCGGCACGTCGAATCTAGGTAACTGGACTTCTGTCGGTCGGACCGCGGTTGTCACCACATTAGCCGGCTCGACGTCAGGGATCGTAACCTTGTTCGGCCGGCGACTGTTGATTGGCCATTGGGATGCAATAGATGTGTGCAATGGCTTGCTTGGAGGATTTGTCGCAATCACGTCAGGATGCTCAGTGGTCGAGCCGTGGGCCGCGATTATCTGTGGTTTTGTCTCGGCGTGGGTCTTGATTGGGCTCAACATCTTGGCACTTAAACTGAACTATGATGACCCCCTAGAGGCAGCCCAATTGCATGGTGGGTGTGGGGCTTGGGGTTTGATATTCACGGGATTGTTTGCCAAAGAGGAGTTTGTGAGTCAAATCTACGGGGTGTCAAGGCCCTATGGGCTCCTGTTAGGGGGTGGATGGGCTTTGATTGGGGCCCAAGTTGTTGAAGTGTTGGTAATATTGGGCTGGGTTAGTGTGACAATGGGCCCATTGTTCTATACCTTACTGAAGCTTAAGCTTTTGAGAATCTCTAGAGCTGATGAAGTCACAGGCCTTGATATCTCAAGCCATGGGGGATATGCTTATGCTCATCATGAGGAAAGTTATCCTCAATCATATTCAGATTATATGCGTATGAGAGAGGATCAATCCTAG 1380 0.4964 MEASWEESVTSSINTIYLLFSAYLVFVMQIGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAFGDGSHSNPFIGTDLFALATIPNGTYDYSFFMFQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLTGFVYPVVVHWVWSSNGWLSPSSSQLFLGSGAIDFAGSGVVHLVGAIAGLWGSLVEGPRVGRFDAFGKPVPLRGHNASLVVLGTFLLWFGWFGFNPGSFDKILVAYPGTSNLGNWTSVGRTAVVTTLAGSTSGIVTLFGRRLLIGHWDAIDVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVSQIYGVSRPYGLLLGGGWALIGAQVVEVLVILGWVSVTMGPLFYTLLKLKLLRISRADEVTGLDISSHGGYAYAHHEESYPQSYSDYMRMREDQS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0302 459 NCBIfam ammonium transporter 14 437 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bisa09g0302 459 Gene3D Ammonium transporter AmtB like domains 2 454 IPR029020 -
Bisa09g0302 459 PANTHER AMMONIUM TRANSPORTER 10 433 - -
Bisa09g0302 459 Pfam Ammonium Transporter Family 18 437 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bisa09g0302 459 ProSitePatterns Ammonium transporters signature. 170 195 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bisa09g0302 459 FunFam Ammonium transporter 1 452 - -
Bisa09g0302 459 SUPERFAMILY Ammonium transporter 11 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0302 Bisa-ChrBisa09 4223331 4224710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0302 7 443 Inorganic Solute Cotransporters AT1G64780 68.623 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0302 09 4223331 4224710 Bisa09g0302 09 4223331 4224710 ECH