Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0296 ATGGAAGCCAATGCCATGGCTATGGCTATGGCTATAACTATGCCTAACCCTTCCATGCACCATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGGTCCTCCTTTGTCAGCCATAGACAGATTCTTGTGGTTGTGGGGCCAACTCAACCCACCATCCAACGGTGCACCCGACTTGCTGGCTTGCTCTGGGGGTGCCACGTGGCCTCAGTACAGGGAAGTAGAAGAAGAAGCGAGTTTGAATATTCATGGCTTTTCTGCAAAATATGCAGTGAAGAATAATGGTAATAAACTGGAAAGGAGAGGTAATAAGAAAGGCTCTTCTTCTGTGTTGCTGATCAAAGGACTGTGGACCGATGAAGAAGATAGGAAACTGGTGAGGTTGGTGGAGGAATATGGAGTAAGAAAATGGGCTCAGATAGCTGAGAAGTTGGAGGGAAGAGCTGGGAAGCAGTGCAGAGAGAGATGGCATAATCATTTGCGTCCTGATATTAAGAAAGATAGTTGGAGTGATGAAGAAGAGAGAATATTAGTGGAGACTCATGCAAAAGTGGGGAACAGATGGGCTGCAATAGCTAAGAGCATTCCTGGAAGAACAGAGAATGCTATAAAGAACCATTGGAATGCCACCAAAAGGAGGCAGAACCCTAAAAGAAAGCACAAGAATATTACAAACAACAATGGAAGAAACCCACCTTCCTCTATTCTTCAAGACTACATCAGAAGCACGACTCTTAATAACGGTACAACAACCGCCACTAATGATCAAGAGGACCCACCGGAAAACCAGTTCAATCTTGCGGTTTCTGATCATGACCATGAAGCCTCTGATCATCATGAATCTGTGATGGTTGATGTAGATGACGAGCTACTCTTCATGCAGCAGTTATTCTCAGAGAGCCATCAGATTCATAATGGAGGGCATGGAGCTGATTCTGTTACTCATACTAGTTCTCCCATGGAACACCATCATAATTCTGATCTGTATCTGTCTCAGTTGTTGAATGGGGCTGCTTGTAATTCATCAGGTTATTGTGATTATGGAAAAGATCAAAACTTGAACGTGGGTTTGCAGGTAGGGCTTGATGAGCAAGCTTGGAATGATGGGAAGAGAGAGATGGATTTGATGGAGTTGGAACTTTTCTGGTTCGATGTTGATAGAGTTTGGGAGGATATTCTGGGTTCTGTTAGGGTTTATGCACAAAAGGATAGTTGGAGTGATGAAGAAGAGAGAATATTAGTGGAGACTCATGCAAAAGTGGGGAACAGATGGGCTGAAATAGCTAAGAGCATTCCTGGAAGAACAGAGAATGCTATAAAGAACCATTGGAATGCCACCAAAAGGAGGCAGAACCCTAAAAGAAAGCACAAGAATATTACAAACAACAATGGAAGAAACCCACCTTCCTCTATTCTTCAAGACTACATCAGAAGCACGACTCTTAATAACGGTACAACAACCGCCACTAATGATCAAGAGGACCCACCGGAAAACCAGTTCAATCTTGCGGTTTCTGATCATGACCATGAAGCCTCTGATCATCATGAATCTGTGATGGTTGATGTAGATGACGAGCTACTCTTCATGCAGCAGTTATTCTCAGAGAGCCATCAGATTCATAATGGAGGGCATGGAGCTGATTCTGTTACTCATACTAGTTCTCCCATGGAACACCATCATAATTCTGATCTGTATCTGTCTCAGTTGTTGAATGGGGCTGCTTGTAATTCATCAGGTTATTGTGATTATGGAAAAGATCAAAACTTGAACGTGGGTTTGCAGGTAGGGCTTGATGAGCAAGCTTGGAATGATGGGAAGAGAGAGATGGATTTGATGGAGTTGGTTTCTTCTTCTTCTTCTCAGTTTTCTGCTACTATCAGAAGCATCTGA 1887 0.4314 MEANAMAMAMAITMPNPSMHHSSSSSSSSSSGPPLSAIDRFLWLWGQLNPPSNGAPDLLACSGGATWPQYREVEEEASLNIHGFSAKYAVKNNGNKLERRGNKKGSSSVLLIKGLWTDEEDRKLVRLVEEYGVRKWAQIAEKLEGRAGKQCRERWHNHLRPDIKKDSWSDEEERILVETHAKVGNRWAAIAKSIPGRTENAIKNHWNATKRRQNPKRKHKNITNNNGRNPPSSILQDYIRSTTLNNGTTTATNDQEDPPENQFNLAVSDHDHEASDHHESVMVDVDDELLFMQQLFSESHQIHNGGHGADSVTHTSSPMEHHHNSDLYLSQLLNGAACNSSGYCDYGKDQNLNVGLQVGLDEQAWNDGKREMDLMELELFWFDVDRVWEDILGSVRVYAQKDSWSDEEERILVETHAKVGNRWAEIAKSIPGRTENAIKNHWNATKRRQNPKRKHKNITNNNGRNPPSSILQDYIRSTTLNNGTTTATNDQEDPPENQFNLAVSDHDHEASDHHESVMVDVDDELLFMQQLFSESHQIHNGGHGADSVTHTSSPMEHHHNSDLYLSQLLNGAACNSSGYCDYGKDQNLNVGLQVGLDEQAWNDGKREMDLMELVSSSSSQFSATIRSI 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0296 628 CDD SANT 403 446 IPR001005 -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 480 499 - -
Bisa09g0296 628 SUPERFAMILY Homeodomain-like 112 206 IPR009057 -
Bisa09g0296 628 Pfam Myb-like DNA-binding domain 401 443 IPR001005 -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 445 470 - -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 244 262 - -
Bisa09g0296 628 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 163 IPR017930 -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 209 223 - -
Bisa09g0296 628 SMART sant 164 212 IPR001005 -
Bisa09g0296 628 SMART sant 400 448 IPR001005 -
Bisa09g0296 628 SMART sant 112 161 IPR001005 -
Bisa09g0296 628 CDD SANT 116 159 IPR001005 -
Bisa09g0296 628 SUPERFAMILY Homeodomain-like 400 453 IPR009057 -
Bisa09g0296 628 FunFam Transcriptional activator Myb isoform A 112 165 - -
Bisa09g0296 628 Gene3D - 112 164 - -
Bisa09g0296 628 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 400 450 IPR017930 -
Bisa09g0296 628 PANTHER MYB PROTEIN-RELATED 395 466 - -
Bisa09g0296 628 ProSiteProfiles Myb-like domain profile. 160 210 IPR001005 -
Bisa09g0296 628 Gene3D - 403 468 - -
Bisa09g0296 628 Gene3D - 166 232 - -
Bisa09g0296 628 ProSiteProfiles Myb-like domain profile. 113 159 IPR001005 -
Bisa09g0296 628 CDD SANT 167 210 IPR001005 -
Bisa09g0296 628 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 214 IPR017930 -
Bisa09g0296 628 Pfam Myb-like DNA-binding domain 116 173 - -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 244 263 - -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 445 459 - -
Bisa09g0296 628 ProSiteProfiles Myb-like domain profile. 396 446 IPR001005 -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 480 498 - -
Bisa09g0296 628 MobiDBLite consensus disorder prediction 209 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0296 Bisa-ChrBisa09 4104506 4113671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0296 395 617 MYB Transcription Factor Family AT5G58850 37.770 4.77e-33 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g0296 Myb_DNA-bind_6 2e-19 CL0123