Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0294 ATGGCAACCATTGCTACTTTCTTTCACAAGTTCCTTTCTCTCTTTGTCCTCCTTCTCCACCTCGGCTGCTTCATCTTCTCCACCACCCCCTCCTCCGCCTCCGGTGAAGAAGTCCTCCAGGATACTCGCAAGCCCTCAAAGAAACGCAAGGTCTCCCCTGTTTCACATTCCCTGCAGCAACAACAACAACCACCCTCTCCTTCCCATCCCAAATTCAAAACACACAAGGCTCTTTCTTCTTCTTGGACTTTCATCAAACACCTTTTCTCCACTAAATCCTGCAAGTCCAGCGACGTCGTCCAGGGATCACCCCAGCCCTCCTCCGCCTCGGCCTCCACCAACACCACCTCCGCCTCCGCCGCCGCCGCAGCATTCCCTTCCTTGACCTCCGCCAGATCCTCCCAGCAGTCGCTGGTCTCGCTCACGCAACCCGACTCCCACTCGTTGGATCCTCCGAGAAAGAAACCGTCCGCGTCGTGCCCGGAATCCGATATCTCCGCCGACAACAACAACTTCTTTCCCCTCCGTAACGACATCTTCCCCTGCACTGCCTGCGGCGAGATTTTCCAGAAACCCAATGTCCTGGAACAGCACCAATCGCTCAAGCACGCCGTGTCGGAGCTCGCGGAAGCCGACGCGGGTCACAACATAGTGCAGATAATATTCAAGTCGGGTTGGACCGACACCCAGAAATGCCCGAAAATCAGTCGGATCCTAAAGATCCACAACAGCCAGAAGATCCTCTCCAAGTTCGAGGAGTACAGAGAAACAGTCAAGGCCAAGGCCGCGCGAAACGGCGCAGTAAAGAAGCGCGACGAGAGGTGCATTGCCGACGGCAACGAGCTCATGAGGTTCCACTGTTCGACGTTCCTCTGCGACCTGGGACTCAACGGGGATTCCGGCATTTGTGGGCAGCAATATTGTAATATCTGCGGCATCATCAAGTCGGGGTTCTCTCCCAAGTTGGACGGAATCTCCACGCTATCTACCAGCTGGAGGGCCCACGCGGCGATCCCCGACGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCCATGCTGGTGTGCCGGGTCATCGCGGGTCGGATCGGGTGCGACGCGGACGAGGCCGACAAGGAGGACGCCGGTTATGATTCCCTGTTGGCGCGCGGAGGAAGCGGAATTTATACCCGCTTGGACGAAGAGGAGCTATTGGTGTTTAATCCTAGAGCTATTTTAATCGTGTGGTGTTGA 1239 0.5626 MATIATFFHKFLSLFVLLLHLGCFIFSTTPSSASGEEVLQDTRKPSKKRKVSPVSHSLQQQQQPPSPSHPKFKTHKALSSSWTFIKHLFSTKSCKSSDVVQGSPQPSSASASTNTTSASAAAAAFPSLTSARSSQQSLVSLTQPDSHSLDPPRKKPSASCPESDISADNNNFFPLRNDIFPCTACGEIFQKPNVLEQHQSLKHAVSELAEADAGHNIVQIIFKSGWTDTQKCPKISRILKIHNSQKILSKFEEYRETVKAKAARNGAVKKRDERCIADGNELMRFHCSTFLCDLGLNGDSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHAAIPDEVEEEFKFMNVKRAMLVCRVIAGRIGCDADEADKEDAGYDSLLARGGSGIYTRLDEEELLVFNPRAILIVWC 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0294 412 Gene3D - 204 411 - -
Bisa09g0294 412 ProSiteProfiles Zinc finger C2H2 type domain profile. 180 208 IPR013087 -
Bisa09g0294 412 MobiDBLite consensus disorder prediction 52 74 - -
Bisa09g0294 412 MobiDBLite consensus disorder prediction 35 74 - -
Bisa09g0294 412 SUPERFAMILY ADP-ribosylation 205 404 - -
Bisa09g0294 412 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 80 409 - -
Bisa09g0294 412 ProSitePatterns Zinc finger C2H2 type domain signature. 182 203 IPR013087 -
Bisa09g0294 412 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0294 Bisa-ChrBisa09 4090942 4093167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0294 82 408 C2H2 Transcription Factor Family AT2G29660 54.303 3.38e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa09g0294 None None None