Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0286 ATGAAGTGGGATACGGGAATCCTTTCACCGGACCCGAATTGGATTGTTGAAGATGGCACTAACAGGAATCCCAGATGGAGTTGCGCAGAGAACAAACTGTTCGAGAACGCTCTCGCGGTGTACGACAAAGATACCCCAGATCGGTGGCAGAAGGTGGCGGCGATGATTCCGGGGAAGACCGTCGGCGACGTGATGAAGCAGTACAAAGCGCTCGAAGACGACGTTACCGACATCGAAGCCGGATTGGTGTCTGTTCCTGAATACAGCACTCCGTTCACCGTGGACTATTGGGTGAACTCTTCTTCTTCCTCTGGGTACGATCCCTCGAGGGGATTCTCAGGTAAGAGATCGTCGTCTTCCTCAGGGAGACCCTCTGAGCAGGAGAGGAAGAAGGGAGTCCCCTGGACGGAAGAAGAGCACAAACTGTTCCTTCTGGGGTTGAAGAAGCACGGGAAAGGAGACTGGAGGAACATATCGAGGAACTTCGTGCTGACTCGGACGCCGACTCAGGTGGCGAGTCACGCTCAGAAGTACTTCATAAGGCAGCTCTCCGGCGGGAAGGACAAGAGAAGAGCTAGCATCCATGACATCACCACCGTGAACCTCACAGAATCGTCCACACCCACAAGACCAACCCCACCACCACCACCCCCACCACCACCATCTTCTTCTTCACAAGACATGATGATCTCGCAGCAGCAAGCAAATGTCAATCCTGCTGTTCCCAGATCACAGTTTCATCAATGGAACAACCAGGGACTGTTCATGTCTCCTTTTGGGGTCAACAATGGCGATGACTCCTCACCTTCATCATCCTCCTGCTTCGAGTTCAAAATGCAGGCACAGAGTCTGCACAGAACTGGTCTTCATCATCATCATCATCATCATCAATCTTCCTACTTGTTAGCACCTCAAGCTCAGAACATGGTGTTCCAATTACCATGA 945 0.5196 MKWDTGILSPDPNWIVEDGTNRNPRWSCAENKLFENALAVYDKDTPDRWQKVAAMIPGKTVGDVMKQYKALEDDVTDIEAGLVSVPEYSTPFTVDYWVNSSSSSGYDPSRGFSGKRSSSSSGRPSEQERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVLTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTESSTPTRPTPPPPPPPPPSSSSQDMMISQQQANVNPAVPRSQFHQWNNQGLFMSPFGVNNGDDSSPSSSSCFEFKMQAQSLHRTGLHHHHHHHQSSYLLAPQAQNMVFQLP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0286 314 FunFam Transcription factor SRM1 19 85 - -
Bisa09g0286 314 NCBIfam myb-like DNA-binding domain, SHAQKYF class 130 182 IPR006447 GO:0003677
Bisa09g0286 314 CDD SANT 134 179 IPR001005 -
Bisa09g0286 314 Gene3D - 133 183 - -
Bisa09g0286 314 ProSiteProfiles Myb-like domain profile. 127 179 IPR001005 -
Bisa09g0286 314 CDD SANT 25 71 IPR001005 -
Bisa09g0286 314 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 21 277 IPR043363 -
Bisa09g0286 314 FunFam transcription factor MYB1R1 133 184 - -
Bisa09g0286 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 127 183 IPR017930 -
Bisa09g0286 314 MobiDBLite consensus disorder prediction 102 121 - -
Bisa09g0286 314 ProSiteProfiles SANT domain profile. 135 183 IPR017884 -
Bisa09g0286 314 SUPERFAMILY Homeodomain-like 24 79 IPR009057 -
Bisa09g0286 314 MobiDBLite consensus disorder prediction 208 224 - -
Bisa09g0286 314 Gene3D - 19 85 - -
Bisa09g0286 314 SMART sant 131 181 IPR001005 -
Bisa09g0286 314 SMART sant 22 74 IPR001005 -
Bisa09g0286 314 MobiDBLite consensus disorder prediction 102 135 - -
Bisa09g0286 314 Pfam Myb-like DNA-binding domain 134 179 IPR001005 -
Bisa09g0286 314 SUPERFAMILY Homeodomain-like 128 182 IPR009057 -
Bisa09g0286 314 MobiDBLite consensus disorder prediction 198 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0286 Bisa-ChrBisa09 3983384 3984417 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa09g0286 Myb_DNA-binding 9.5e-13 CL0123