Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0277 ATGAAGAAAACCCCAGAACCCCATTTACGTAATTCAAGCCAAATAAATCAGAATGCCGACAAGGATACAAAGGGGCACAATCATGGGGCTCATAATTCCCTGAAATATTTTAAATCTGTTGCCAAGAAATTTTCAGGTGTTTTTGCTTTCTTTCGCTCTAGCGGAAGAAAATCGGCTGCAAAAAATGTTGGAAGTGATGACAGAAGGAGTACAAGTAAAACCAGATTGGTATCATCATTTTCAACGGATGTATCATCTGAGAGTAAAAACAGGAGTTCATCAAAATGGAAGTTTTCTTCTTCCTATGCATCTTCTAGCACCACAAGTGGACAACTTGGAGTGGGCAACTTCTCCTTTCAAGAAATTTACAAGGCAACAGGAAAATTTTCTCTAGATAATAAGATTGGAGAAGGTGGGTTTGGAACTGTGTATAAGGGGAGGCTCAATGATGGATCTCTTGTTGCCATAAAGCGCGCCAAGAAGAATGTACAAGACAGGACCTTATCTGAGTTCAAGAATGAAATACGCACCTTGTCAAAAATTGAGCATCTGAATCTTGTGAGGTTATACGGATATTTGGAGCATGAAGATGAAAAGATTATAGTCGTTGAATATGTTGGTAATGGGAATCTTCGGGAACATCTAGACGGTAAATGCGGAGAAGGACTAGAAATCGGTGAGCGCCTGGACATAGCAATTGATATAGCTCACGCGATTACCTACCTTCATATGTACACAGATCGTCCAATAATCCATAGGGACATCAAAGCATCCAACATCTTAATCTCAGAGAAACTGAGGGCCAAAGTGGCAGATTTTGGATTTGCACGTTCGTTTTCTGATGATCCTGCAGCAACCCATATATCAACTCAAATTAAAGGAACGGCTGGATACTTGGATCCTGATTACCTGCGAACCAATCAACTCACTGACAAGAGTGACGTTTATTCCTTTGGCGTATTGCTCGTAGAAATGATGACAGGGCGCTATCCAATAGAATCAAAGAGGCCTCTCAGTGAGAGAGTGACAATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGCTGTCATTGCCATGGACCTGAAGCTGCGGAGAACTCCAGCTTCGACCATGGCGGTGGAGAAGGTTCTCAAGCTAGCCTACCAGTGCCTTTCGCCGTTGAGACAGTCCCGGCCAACCATGAAGAGTTGTGCAGAGATTCTGTGGGGAATCCGAAAAGAGTTTAGAGATAAATCATTATCTCATGATCCCCCCCTTCTTCCTTCTCACCATTCTGCAGATTTTCCTCCTAGTGATGTTAGGAAGAATAGGCGTATGTCGTTTGATATTGAAGATGATGAAAGCTATAAATTCGTCTCTGCATAA 1368 0.4232 MKKTPEPHLRNSSQINQNADKDTKGHNHGAHNSLKYFKSVAKKFSGVFAFFRSSGRKSAAKNVGSDDRRSTSKTRLVSSFSTDVSSESKNRSSSKWKFSSSYASSSTTSGQLGVGNFSFQEIYKATGKFSLDNKIGEGGFGTVYKGRLNDGSLVAIKRAKKNVQDRTLSEFKNEIRTLSKIEHLNLVRLYGYLEHEDEKIIVVEYVGNGNLREHLDGKCGEGLEIGERLDIAIDIAHAITYLHMYTDRPIIHRDIKASNILISEKLRAKVADFGFARSFSDDPAATHISTQIKGTAGYLDPDYLRTNQLTDKSDVYSFGVLLVEMMTGRYPIESKRPLSERVTIRWAMQMLKQGDAVIAMDLKLRRTPASTMAVEKVLKLAYQCLSPLRQSRPTMKSCAEILWGIRKEFRDKSLSHDPPLLPSHHSADFPPSDVRKNRRMSFDIEDDESYKFVSA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0277 455 Pfam Protein tyrosine and serine/threonine kinase 130 402 IPR001245 GO:0004672|GO:0006468
Bisa09g0277 455 SUPERFAMILY Protein kinase-like (PK-like) 104 405 IPR011009 -
Bisa09g0277 455 MobiDBLite consensus disorder prediction 74 92 - -
Bisa09g0277 455 Gene3D Transferase(Phosphotransferase) domain 1 206 417 - -
Bisa09g0277 455 SMART serkin_6 129 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0277 455 ProSiteProfiles Protein kinase domain profile. 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0277 455 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
Bisa09g0277 455 ProSitePatterns Protein kinases ATP-binding region signature. 135 161 IPR017441 GO:0005524
Bisa09g0277 455 MobiDBLite consensus disorder prediction 59 92 - -
Bisa09g0277 455 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 93 205 - -
Bisa09g0277 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Bisa09g0277 455 Gene3D Phosphorylase Kinase; domain 1 86 205 - -
Bisa09g0277 455 PANTHER OS01G0750732 PROTEIN 44 408 - -
Bisa09g0277 455 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0277 Bisa-ChrBisa09 3880597 3883883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0277 101 395 Receptor kinase-like Gene Family AT1G79620 43.046 1.00e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Bisa09g0277 PK_Tyr_Ser-Thr 3.7e-52 CL0016