Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0247 ATGTCCCAAGCAATAGCTGGGGCTAATGCCTCCAATTCATCCTCATTGGAATGCCCTAATGGTGATTCTGAATCTAATGATGACCAATCTATGTCCAATAATGAGGAAGACGATGATGCCACTAAAGAATCACCAGCTACTGCTCCTAATCAATCAGGTAATTACGTTCAAGAACACCAAGGGATGCAGAATGCTTCATCATCTGCACCCTCCATGCGAGATGAATGTCTTACGCAGACTCCACAGCTTGAACTTGTTGGTCATTCAATCGCATGTGCTTCGAATCCTTATCAGGATCCATATTATGGGGGAATGATGGCAGCTTATGGACCCCATCAGCTGGGATATCCTCCTTTTATAGGAATGCCTCATGCCAGAATGCCTTTGCCCCCGGAGATGGCACAAGAGCCTGTTTATGTGAATGCTAAACAATACCAAGCAATTCTCAGGCGTCGACAGGCTCGTGCTAAAGCAGAGCTTGAAAAGAAGCTGATAAAAGTTAGAAAGCCTTATCTTCATGAATCTCGGCACCAGCATGCTATGAGAAGGGCAAGGGGTACTGGAGGACGCTTTGCAAAGAAAAATGATGCTGCTGAATCCTCAAACCCCTCGGGCAATGGAAAAGATATGGGATCTGGTCCAGTCCTATCGTCACAGTCAATTAGTTCATCTGGCTCTGAACCTTTACACTCTGAGTCTGCCGAAACCTGGAACTCCCCCAATATGCAACAACATGCTAGAGGATATAAAGTTTCTGACAGATATGCAGCACACTACACCAACAGTAGTGGCACTTACAATAATCATAGTGGCTTGCAATCTTCCTCTTACCATCTGCACTCTGGTGAAAGAGTGGAGGAAGGGGACTGTTCGGGGCAACAACGGGGGAGCATCTCGTCTGAGCACACTTCACAGAGGCGTCTTGCGATTCAGTAA 936 0.4637 MSQAIAGANASNSSSLECPNGDSESNDDQSMSNNEEDDDATKESPATAPNQSGNYVQEHQGMQNASSSAPSMRDECLTQTPQLELVGHSIACASNPYQDPYYGGMMAAYGPHQLGYPPFIGMPHARMPLPPEMAQEPVYVNAKQYQAILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNDAAESSNPSGNGKDMGSGPVLSSQSISSSGSEPLHSESAETWNSPNMQQHARGYKVSDRYAAHYTNSSGTYNNHSGLQSSSYHLHSGERVEEGDCSGQQRGSISSEHTSQRRLAIQ 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0247 311 MobiDBLite consensus disorder prediction 197 242 - -
Bisa09g0247 311 ProSiteProfiles NF-YA/HAP2 family profile. 134 194 IPR001289 GO:0003700|GO:0006355
Bisa09g0247 311 Gene3D - 134 196 - -
Bisa09g0247 311 MobiDBLite consensus disorder prediction 44 76 - -
Bisa09g0247 311 MobiDBLite consensus disorder prediction 1 76 - -
Bisa09g0247 311 MobiDBLite consensus disorder prediction 262 311 - -
Bisa09g0247 311 MobiDBLite consensus disorder prediction 262 279 - -
Bisa09g0247 311 ProSitePatterns NF-YA/HAP2 subunit signature. 139 159 IPR018362 GO:0003677|GO:0016602
Bisa09g0247 311 SMART cbf3 133 194 IPR001289 GO:0003700|GO:0006355
Bisa09g0247 311 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 11 248 IPR001289 GO:0003700|GO:0006355
Bisa09g0247 311 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 136 191 IPR001289 GO:0003700|GO:0006355
Bisa09g0247 311 MobiDBLite consensus disorder prediction 292 311 - -
Bisa09g0247 311 PRINTS CCAAT-binding transcription factor subunit B signature 137 159 IPR001289 GO:0003700|GO:0006355
Bisa09g0247 311 PRINTS CCAAT-binding transcription factor subunit B signature 168 191 IPR001289 GO:0003700|GO:0006355
Bisa09g0247 311 MobiDBLite consensus disorder prediction 1 28 - -
Bisa09g0247 311 MobiDBLite consensus disorder prediction 170 242 - -
Bisa09g0247 311 MobiDBLite consensus disorder prediction 170 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0247 Bisa-ChrBisa09 3410337 3415042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0247 6 311 CCAAT-HAP2 Transcription Factor Family AT3G20910 49.355 1.01e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bisa09g0247 CBFB_NFYA 7e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0247 09 3410337 3415042 Bisa09g0247 09 3410337 3415042 ECH