Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0239 ATGGGTCGTATTCCATGCTGTGAGAAGGACAACGTGAAAAGAGGACAGTGGACACCAGAGGAAGATAACAAGCTCTCTTCCTACATTGCTCAACATGGCACCAGGAACTGGCGCCTCATTCCTAAGAATGCTGGCCTCCAAAGATGTGGAAAGAGCTGCAGACTGAGGTGGACTAATTATCTTCGTCCTGATTTGAAACATGGTCAATTTTCGGATGCAGAAGAGCAAACCATTGTGAAGCTTCACTCTGTTTTTGGTAACCGATGGTCACTTATAGCAGCCCAGCTGCCGGGCCGCACGGATAACGATGTCAAAAACCACTGGAACACCAAGCTGAAGAAGAAACTTTCGGGGATGGGTATTGACCCAGTCACGCACAAGCCATTCTCCCACCTGATGGCTGAAATTGCAACAACATTGGCACCTCCACAGGCAGCTCACCTGGCAGAAGCAGCCCTTGGCTGCTTCAAAGATGAGGTGCTCCACCTTCTTACTAAGAGGAAGATCAACTTCCAGGCCCAACACCCCAATGCAGCAATAGGGAATAACATTACCTCTTTCATTAACTATAAAGCTGATGAAAAGGATGACACTGTTGACAAGATTAAGTTTGGCCTATCCAAAGCTATGCAAGAACCTGAAATGATACCCTCTAGTAAACCTTGGGACTGCACTGCGGCTACATCTACTAGTTTTGCAGGGACTTGCAGTGTTTTCCCTACAGTGCCTGGGTTTCATTTTAGTCCGGTGTCTTTCACCAACGAAGGGGATGGGTCACAATGGAGCCAGAGTGTATGTACTGGAAGCACATGCACTGCCATGGATCAGCAAGGTCAATTACATGAAAAACTTGAGGAACATGGAGATGATTCTGATGCTGCAAAAGATATTAGGAACGGATCCAATATATTCAACTCAGACTGTGTTTTGTGGGATTTACCATCAGATGATCTAATTAATCCCATGGTATAA 972 0.4599 MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDAEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKRKINFQAQHPNAAIGNNITSFINYKADEKDDTVDKIKFGLSKAMQEPEMIPSSKPWDCTAATSTSFAGTCSVFPTVPGFHFSPVSFTNEGDGSQWSQSVCTGSTCTAMDQQGQLHEKLEEHGDDSDAAKDIRNGSNIFNSDCVLWDLPSDDLINPMV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0239 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa09g0239 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa09g0239 323 Gene3D - 69 128 - -
Bisa09g0239 323 Gene3D - 14 66 - -
Bisa09g0239 323 PANTHER F14D16.11-RELATED 1 321 - -
Bisa09g0239 323 FunFam Transcription factor RAX3 7 67 - -
Bisa09g0239 323 FunFam transcription factor MYB80 69 129 - -
Bisa09g0239 323 CDD SANT 70 112 IPR001005 -
Bisa09g0239 323 CDD SANT 17 61 IPR001005 -
Bisa09g0239 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa09g0239 323 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Bisa09g0239 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa09g0239 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa09g0239 323 SMART sant 13 63 IPR001005 -
Bisa09g0239 323 SMART sant 66 114 IPR001005 -
Bisa09g0239 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0239 Bisa-ChrBisa09 3313081 3314730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0239 1 323 MYB Transcription Factor Family AT5G56110 58.006 2.42e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa09g0239 Myb_DNA-binding 1.6e-15 CL0123