Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0219 ATGAGCGATACTGCGTACAGAGTCGAAACCACTTCTCGTCTCGCTCAATGGAGAATCGAAAATCTCGCTTCCTGCACTTACCGCAAATCTGATCCTTTCAAGATCGGAAAGTGGAATTGGCATTTGGCTGTGGAGAAGAACCGGATTTTATTTGTGAAATTATACCCAGAAATATCAAATCTAACCAGAGATAATCCTCCGATTGCATCTTTCATCGTTCGGGTCGTTAGTTCTGTTGGGGATCGCAAGACCTTGATCCACCCAGTAGTAAAAGACAAACTGATCAAGAACAACGAAGACTTTGTTTGGGCAATTGAGGTTCCACTAACTGGGAAATTCATTATTGACGTTGAGTTCCTTGATTTGAAGACTACATCCCCTAACGGTGGAGAACCTTGCTCCATTTGGGCAGGAGGGTTTACACAGACAAGGGCAAATGCAACAGCAATTGAAGCCCTTGGACGAATGCTAACAGAAGGAATCCACACAGATATTGTGATCAATGCATCTGATGGAAGCATTGGAGCTCATCGCGCTGTTCTTGCTGCTCGGTCCCCTGTATTTCGCAGCATGTTCTCACACAACCTGAAGGAGAAGGAGCTGTCCACCATAAACATCTCAGACATGTCTATTGATGCTTGCCACGCGTTTCTTAATTATCTTTATGGGGTCATTGAACATGAAGAATTTCTCACACACAGGCTGGTCCTTCTGCATGCAGCTGATAAGTATGACATATCTGACTTGAAAGAGGCATGCCACGAGAGCCTTCTTGAAGATATTGATTCAAAAAATGTTCTTGAGAGGCTCCAAAATGCATCTCTTTATCAGTTACCGAAACTGAAGAGTAGTTGTTTGCGGTATCTTGTGAAATTCGGTAAAATATTCGACATTCGTGATGATTTCAATGCCTTCTTGCAATGTGCTGACAGGGATTTGATTGCTGAAGTCTTCCATGAAGTTCTCAATGCCTGGAAAGGGTTCTGA 987 0.4326 MSDTAYRVETTSRLAQWRIENLASCTYRKSDPFKIGKWNWHLAVEKNRILFVKLYPEISNLTRDNPPIASFIVRVVSSVGDRKTLIHPVVKDKLIKNNEDFVWAIEVPLTGKFIIDVEFLDLKTTSPNGGEPCSIWAGGFTQTRANATAIEALGRMLTEGIHTDIVINASDGSIGAHRAVLAARSPVFRSMFSHNLKEKELSTINISDMSIDACHAFLNYLYGVIEHEEFLTHRLVLLHAADKYDISDLKEACHESLLEDIDSKNVLERLQNASLYQLPKLKSSCLRYLVKFGKIFDIRDDFNAFLQCADRDLIAEVFHEVLNAWKGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0219 328 Pfam BTB/POZ domain 156 259 IPR000210 GO:0005515
Bisa09g0219 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Bisa09g0219 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Bisa09g0219 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Bisa09g0219 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Bisa09g0219 328 Gene3D Potassium Channel Kv1.1; Chain A 141 291 IPR011333 -
Bisa09g0219 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0219 Bisa-ChrBisa09 3071221 3073069 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa09g0219 BTB 2.6e-22 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0219 09 3071221 3073069 Bisa05g2844 05 68537271 68544008 CCT
Bisa09g0219 09 3071221 3073069 Bisa09g0219 09 3071221 3073069 ECH