Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0204 ATGCCTGCAAGCTTAAGAAATCCCTCACTTTCCCCCAAAATCCTCTCCTTCACCTTATTTCTCTCAGTAAACTCTCTTCTCTTCTCATGTTGCTTCTCCATTGATGAACAGGGCCAAGCTCTTCTGGCATGGAAGAACAGTTTGAACAGAACAGAAGATGCATTGTTAGCATCATGGAATCCTTCAGATTCAAGCCCTTGCAATTGGGTTGGAGTTCACTGCAACTCCAGAGGAGATGTGGAAGAGATAAACATGAAATCTGTGGACTTGCAAGGCTCATTGCCTTCAAATTTTCAACCTCTCAAGTCCTTGAAGGTTCTTGTGCTCTCATCAGCAAACCTCACAGGAAAAATCCCCAGGGTGATTGGAGACTATGAAGAACTCATTTCCATTGATCTCAGTGGGAATTCTCTTGAAGGCGAAATCCCAGAAGATATTTGCAGGCTAAGAAAACTTGAGAGTTTGTCTCTCCACAGAAACTTCCTTGAGGGTAATATTCCCTCCAACATTGGAAATCTCTCAAGTCTTGTGAATCTGACGCTTTATGATAATCAACTCAGTGGTGAAATTCCAAAGAGTATTGGGTCCTTAAGAAAGCTTCAAGTTTTCAGAGCAGGTGGGAATAAGAATATCAAAGGAGAGCTGCCATGGGAAATAGGAAATTGCACCAACCTGGTCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCATCAATAGGAGATTTGAAGAAGATTCAAACCATAGCCATTTACACAACTCTCTTGTCAGGCTTTATTCCAGAGGAAATTGGGAATTGCAGTGAGCTGCAGAATCTTTTCTTGTATCAGAACTCAATTTCAGGTCCAGTCCCGAGTCAAATTGGGAATCTCAGAAAGCTTCAGAGTCTTCTGTTATGGCAGAACAGTCTAGTGGGCACAATACCAGAAGAACTTGGAAGCTGCACAGAGCTCAAAGTCCTAGACTTTTCAGTCAACCTCCTCACAGGAAGCATACCATGGAGTTTTGGGATGCTTTCAAATGTTGAAGAGCTTCAGCTAAGTGTTAATCAGTTGTCAGGTACCATACCTCCCGAGATTACAAATTGCACTTCTCTGACTCAGTTGGAACTTGACAATAATGCTCTCTCTGGTGAGATTCCCGCTCTCATAGGCAACTTGAAGAGCTTGGATCTGTTCTTTGCATGGCAGAACAAGCTCACAGGAAAAATCCCAGATAGTCTCTCTCAGTGCCAAGATCTTCAGGCACTTGATCTGTCTTACAACAGTCTAATTGGTTCAATACCAAAAGAGCTATTCAGGCTGAGAAACCTCACTAAACTCATGCTCATTTCCAATGAACTATCAGGCATTGTTCCTCCTGATATAGGTAATAGCACAAGTCTCTACAGGTTAAGGTTGAATAAAAATAGACTTGCAGGGTCCATTCCATCTGAGATTGGAAACTTGAAAAATCTCAACTTCATGGATATGAGCAGCAATCAATTTGTAGGAGAGATTCCTCCAACGCTATCCCAATGCCAAAACCTTCAGTTTCTTGACCTTCATTCAAATTCTCTCACGGGTTCTCTTCCAGAGACTCTACCCAGAAGCCTTCAATTAATAGATTTCTCAGATAACAGGCTCACTGGTTCACTGAGTCCTACCATTGATTCATTAACTGAACTAACCAAACTCAGTCTGGGAAAGAATCAACTCAGTGGACGAATCCCAGAAGAAATCTCATCCTGCACTAAGCTTCAACTTCTAGACTTGGGAAGCAATGGTTTCTCTGGAGAAATTCCAGAGCAATTGGGTCAAATCCCTTCACTGGAAATCTCTCTCAATCTCAGCTTCAATCAACTTTCTGGCCGAATCCCATTTCAATTCTCTGGTCTCACAAAACTGGATGTGCTTGACCTCTCCCACAACAACCTCTCAGGGAATCTAAACTCTCTCTCCGACCTTCAAAACCTTGTTTCCTTAAACGTCTCCTTCAATGACTTCTCCGGAGAATTGCCCGACACCCCATTTTTCAGAAACCTCCCTCTGAGCGACCTCACAGCAAATAAAGGGCTCTACATCTCCGGCGCCGGAGTTGTAACTCCGGCAGACGGGGTGGGGCCCAGCAAAGCCCATGCCAGATCAGCAATGAAGGCCACCATGTCCATTCTTCTGAGCGCCAGTGCAATACTAGTCCTCCTCACAGTCTACGCTTTAATCCGTTCTCACATCAGAGACAGAGCAATCATGGAAGACAACACCTGGCAAATGACACTGTATCAGAAGCTCGAAATCTCCTCCATCGATGACGTCATCAAGGGCCTGACGTCATCCAACGTGATCGGCACCGGAAGCTCCGGGGTCGTGTACAGGGTCACAATCCCCAACGGGGAGACTCTGGCGGTGAAAAAGATGTGGTCTTCCGAGGAATCTGGAGCTTTCGAGTCGGAGATTCAAACTCTGGGTTCGATTCGACACAAGAACATCGTGAGACTCCTGGGCTGGGGATCCAACAGGAACCTCAAGCTTCTGTTCTACGATTACCTTCCCAATGGGAGTCTGAGCTCGATGCTTCATGGGTCCGGGAAAGGCGGGGCGGAGTGGGAGACCAGGTACGAGGTTGTGGTGGGAGTGGCTCACGCGCTGGCTTATTTGCACCATGACTGTATGCCTCCTATATTGCACGGAGATGTGAAGGCCATGAACGTGTTGTTGGGTCCTGGGTTGAAACCTTACCTTGCCGATTTCGGATTGGCGAGGATTGTTAACGGAAATAGTGACGGCAGTGACGGCGCTAACGGTGGCGGTGGTGGTGTTGATTCGAAGCCTCTTCTTCATAGACCTTACCTTGCCGGTTCCTATGGATACATGGCTCCTGAGCATGCATCGATGCAGCGAATCACAGAGAAAAGCGATGTGTACAGTTTTGGGGTGGTTCTTCTGGAGGTACTAACAGGGAGGCACCCACTAGACCCAACCCTGCCAGGTGGCGCACACATGGTCCAGTGGGTTCGGAACCACTTAGCCAGCAAGGGTGACCCATCTGACATCCTTGACCCAAAGCTCAGAGGCAGGTCCGACCCCACCATGCACGAGATGCTTCAGACTCTGGCTGTGTCATTCCTCTGCATCAGCACCAAACCCCATGACCGCCCCACCATGAAGGACGTTGTGGCCATGCTCAACGAAATCAGACCTTCTGAGGACTCTAGGGCTGACTCTGATCTCATGATGATGAAGAAGAAGCCAATATCTCCATCATCACATGCCCCTCCATATCCATATCCTCCACCTTCCAAGGTCCTTCTCTCTCAGGGATCTTCTAATGGCTCCTTCAATTTCTCAGATGACTGCATCTAA 3351 0.4691 MPASLRNPSLSPKILSFTLFLSVNSLLFSCCFSIDEQGQALLAWKNSLNRTEDALLASWNPSDSSPCNWVGVHCNSRGDVEEINMKSVDLQGSLPSNFQPLKSLKVLVLSSANLTGKIPRVIGDYEELISIDLSGNSLEGEIPEDICRLRKLESLSLHRNFLEGNIPSNIGNLSSLVNLTLYDNQLSGEIPKSIGSLRKLQVFRAGGNKNIKGELPWEIGNCTNLVMLGLAETSISGSLPSSIGDLKKIQTIAIYTTLLSGFIPEEIGNCSELQNLFLYQNSISGPVPSQIGNLRKLQSLLLWQNSLVGTIPEELGSCTELKVLDFSVNLLTGSIPWSFGMLSNVEELQLSVNQLSGTIPPEITNCTSLTQLELDNNALSGEIPALIGNLKSLDLFFAWQNKLTGKIPDSLSQCQDLQALDLSYNSLIGSIPKELFRLRNLTKLMLISNELSGIVPPDIGNSTSLYRLRLNKNRLAGSIPSEIGNLKNLNFMDMSSNQFVGEIPPTLSQCQNLQFLDLHSNSLTGSLPETLPRSLQLIDFSDNRLTGSLSPTIDSLTELTKLSLGKNQLSGRIPEEISSCTKLQLLDLGSNGFSGEIPEQLGQIPSLEISLNLSFNQLSGRIPFQFSGLTKLDVLDLSHNNLSGNLNSLSDLQNLVSLNVSFNDFSGELPDTPFFRNLPLSDLTANKGLYISGAGVVTPADGVGPSKAHARSAMKATMSILLSASAILVLLTVYALIRSHIRDRAIMEDNTWQMTLYQKLEISSIDDVIKGLTSSNVIGTGSSGVVYRVTIPNGETLAVKKMWSSEESGAFESEIQTLGSIRHKNIVRLLGWGSNRNLKLLFYDYLPNGSLSSMLHGSGKGGAEWETRYEVVVGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGLKPYLADFGLARIVNGNSDGSDGANGGGGGVDSKPLLHRPYLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAHMVQWVRNHLASKGDPSDILDPKLRGRSDPTMHEMLQTLAVSFLCISTKPHDRPTMKDVVAMLNEIRPSEDSRADSDLMMMKKKPISPSSHAPPYPYPPPSKVLLSQGSSNGSFNFSDDCI 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0204 1116 SMART LRR_typ_2 486 510 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 173 197 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 294 318 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 342 366 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 149 172 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 556 580 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 511 534 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 629 652 IPR003591 -
Bisa09g0204 1116 SMART LRR_typ_2 438 462 IPR003591 -
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 36 148 IPR032675 -
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 239 337 IPR032675 -
Bisa09g0204 1116 MobiDBLite consensus disorder prediction 1098 1116 - -
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 149 238 IPR032675 -
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 431 531 IPR032675 -
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 610 694 IPR032675 -
Bisa09g0204 1116 PRINTS Leucine-rich repeat signature 629 642 - -
Bisa09g0204 1116 PRINTS Leucine-rich repeat signature 417 430 - -
Bisa09g0204 1116 SUPERFAMILY L domain-like 34 308 - -
Bisa09g0204 1116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Bisa09g0204 1116 Pfam Leucine rich repeat 610 665 IPR001611 GO:0005515
Bisa09g0204 1116 SUPERFAMILY L domain-like 232 528 - -
Bisa09g0204 1116 ProSiteProfiles Protein kinase domain profile. 772 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0204 1116 MobiDBLite consensus disorder prediction 1078 1116 - -
Bisa09g0204 1116 SUPERFAMILY L domain-like 473 687 - -
Bisa09g0204 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 209 334 - -
Bisa09g0204 1116 ProSiteProfiles Leucine-rich repeat profile. 631 653 IPR001611 GO:0005515
Bisa09g0204 1116 FunFam Leucine-rich receptor-like protein kinase family protein 337 609 - -
Bisa09g0204 1116 SMART serkin_6 772 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 338 430 IPR032675 -
Bisa09g0204 1116 Gene3D Ribonuclease Inhibitor 532 609 IPR032675 -
Bisa09g0204 1116 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 846 1076 - -
Bisa09g0204 1116 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 309 1053 - -
Bisa09g0204 1116 ProSitePatterns Protein kinases ATP-binding region signature. 778 801 IPR017441 GO:0005524
Bisa09g0204 1116 FunFam Putative LRR receptor-like serine/threonine-protein kinase 756 845 - -
Bisa09g0204 1116 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Bisa09g0204 1116 Gene3D Transferase(Phosphotransferase) domain 1 846 1081 - -
Bisa09g0204 1116 Gene3D Phosphorylase Kinase; domain 1 734 845 - -
Bisa09g0204 1116 FunFam Leucine-rich receptor-like protein kinase family protein 34 196 - -
Bisa09g0204 1116 SMART LRR_sd22_2 149 175 - -
Bisa09g0204 1116 SMART LRR_sd22_2 629 654 - -
Bisa09g0204 1116 SMART LRR_sd22_2 270 296 - -
Bisa09g0204 1116 SMART LRR_sd22_2 556 579 - -
Bisa09g0204 1116 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 695 - -
Bisa09g0204 1116 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Bisa09g0204 1116 SUPERFAMILY Protein kinase-like (PK-like) 755 1058 IPR011009 -
Bisa09g0204 1116 Pfam Protein kinase domain 775 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0204 Bisa-ChrBisa09 2586226 2590475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0204 31 1116 Receptor kinase-like Gene Family AT5G56040 66.758 0.0 1432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa09g0204 Pkinase 5.1e-36 CL0016