Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0173 ATGCGTCCAAGAAGCACTCTCATCTTCTTCCTCTTAGCGGTCTTCAGCTTCTTGGACCCAACCGTGCTTGCCGTCGATGGAAGCGCCTCCTTCGAGTTCCAAGCTTTCGATTTTCGAAACATCACTCTTCTAGGCGATTCCTATCTCTGGAAAGGCATCGTCGGCCTCACCAGAGCCGCCGACGTCCCCACTTCCAGCGCCGGATCCGTAATTTACAACAGACCCATCTATCTCTTCGACCCTGAATCAAACACCCCGTCTTCGTTCTCTACAAGATTCACTTTCTTCATCAAAAATCCTAATCCCAGCTCGTTCGGGGACGGATTGGCGTTCTTTCTTTCTCCGGCCAACGACACTCTCGGCAGCAGCGGTGGGTATCTGGGTCTCGTCAATTCCTCGCATTTGGCACAAAACAAGTTTGTCGCAATCGAGTTCGATACCCGACTCGATTCGAATCTCAATGACCCGAATGAGAATCATGTGGGTTTGGATATAAACAGTACGGTCTCGGTCAAGACAGGGAATCCGATCTTGCAGGGGATTAATCTGAAGAGTGGGAATTCGATCACGGCTTGGATTGATTACAAGATCAGCAGAAGGAATCTGAAAGTTTCCTTGAGTTATTCAAGCTTTAAGCCTGAACAGCCGGTGCTGAGTGTTGATGTGGACCTTTCTGATCATTTGAAGGGGAAATTGTATGCGGGGTTTTCGGCTTCTACTGAGGGAAGCACTGAGCTTCACCAGATTAGGAATTGGAGCTTTCAGTCTTTTGGGTTTGTTCCTGCAAGACCAAAGTCGCATCCTCACAACATTTCAGAAAGCTCAGTGACTATCGCAGCGGGCATCCCCAGATCAGATTCCAGAAAGCAGTACGATAAGAGACTCGAATTAGGCGTCATTGCGGGTCCAGCAGTTTTCATTGTAGTCCTTACTGTTTTGGGTTATATTTCTGTGAAAAAATGGAAGGGCATCAGAAAACAGAAAGGCTTGAAAACAGAGTTTGTGGCTTGTCCTAGGGAATTCAGTTTCAAAGACTTGAAATCAGCCACAAAAGGGTTTCACCCCAGTAGGATCATAGGGCATGGATCATTTGGGACAGTTTACAAAGCTTTCTTTATATCTTCAGGAACCATTGCTGCTGTGAAAAGGTCAAGACACTCACATGAAGGTGAAACAGAATTCCTAGCTGAACTGTCCATTATAGCTGGCTTGAGGCACAAGAACTTGGTTCAGCTCCAAGGTTGGTGCGTTGAAAAAGGTGAATTGTTGCTTGTGTATGATTTCATGCCCAATGGGAGCTTAGACAAGATTCTTTACAGAGAATCTGATGGAGGTAAGTTACTGAATTGGTCTCATAGACTGAATATTGCTATTGGGGTGGCCTCTGTTCTTAGTTATCTTCATCAAGAGTGTGAGCAGAGAGTGATTCATAGAGACATTAAGGCAGGAAATATATTGCTAGATGGAAACTTCAACCCGAGGTTAGGTGATTTTGGATTGGCTAAGCTCATGGATCATGATAAAAGCCCTGTTTCAACATTAACTGCTGGAACAATGGGATACCTTGCGCCTGAGTATCTTCAGCATGGGAAAGCAACTGAGAAAACTGATGTTTTCAGCTATGGAGTCGTTGTGCTCGAAGTGGCTTGTGGGAGGAGACCAATTGAAAGGGAGGGTCCAAAAATGGTGAATTTGATTGATTGGGTTTGGGGGCTTCACTCTGAAGGGAAGATACTCGAAGCAGCTGATAAGAAACTGAATGGAGAATTTGAAGACGAAGAGATGAGAAAGCTGTTACTGTTAGGCTTGAGCTGTGCACACCCTGATAGTTCAGAGAGGCCTTCCATGAGAAGAGTGCTTCAGATTCTGAACAATGAAGCAGCCCCTCTCGTTGTGCCTATGGTGAAGCCAAGCCTTACTTTCTCCAGTGGGCTGCCTTTGACTATTGAAGATATTGTTTCAGAGACCGAAGACTTTTATACCATTCAGTCCACACTTTAA 2001 0.4553 MRPRSTLIFFLLAVFSFLDPTVLAVDGSASFEFQAFDFRNITLLGDSYLWKGIVGLTRAADVPTSSAGSVIYNRPIYLFDPESNTPSSFSTRFTFFIKNPNPSSFGDGLAFFLSPANDTLGSSGGYLGLVNSSHLAQNKFVAIEFDTRLDSNLNDPNENHVGLDINSTVSVKTGNPILQGINLKSGNSITAWIDYKISRRNLKVSLSYSSFKPEQPVLSVDVDLSDHLKGKLYAGFSASTEGSTELHQIRNWSFQSFGFVPARPKSHPHNISESSVTIAAGIPRSDSRKQYDKRLELGVIAGPAVFIVVLTVLGYISVKKWKGIRKQKGLKTEFVACPREFSFKDLKSATKGFHPSRIIGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGETEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKILYRESDGGKLLNWSHRLNIAIGVASVLSYLHQECEQRVIHRDIKAGNILLDGNFNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQHGKATEKTDVFSYGVVVLEVACGRRPIEREGPKMVNLIDWVWGLHSEGKILEAADKKLNGEFEDEEMRKLLLLGLSCAHPDSSERPSMRRVLQILNNEAAPLVVPMVKPSLTFSSGLPLTIEDIVSETEDFYTIQSTL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0173 666 PANTHER - 56 633 - -
Bisa09g0173 666 FunFam L-type lectin-domain containing receptor kinase VIII.1 27 267 - -
Bisa09g0173 666 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Bisa09g0173 666 FunFam L-type lectin-domain containing receptor kinase VIII.1 429 641 - -
Bisa09g0173 666 Pfam Protein kinase domain 354 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0173 666 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Bisa09g0173 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Bisa09g0173 666 SUPERFAMILY Protein kinase-like (PK-like) 337 648 IPR011009 -
Bisa09g0173 666 Pfam Legume lectin domain 29 262 IPR001220 GO:0030246
Bisa09g0173 666 CDD lectin_legume_LecRK_Arcelin_ConA 30 258 IPR001220 GO:0030246
Bisa09g0173 666 CDD STKc_IRAK 359 625 - -
Bisa09g0173 666 ProSiteProfiles Protein kinase domain profile. 353 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0173 666 SMART serkin_6 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0173 666 Gene3D Phosphorylase Kinase; domain 1 316 428 - -
Bisa09g0173 666 Gene3D - 27 263 - -
Bisa09g0173 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Bisa09g0173 666 FunFam L-type lectin-domain containing receptor kinase VIII.1 317 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0173 Bisa-ChrBisa09 2228873 2230873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0173 7 658 Receptor kinase-like Gene Family AT5G55830 63.323 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa09g0173 Pkinase 1.2e-49 CL0016