Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0171 ATGGAAGGTGGAGGTCCCTTCTTTCCCTCTGGTCAGCTTCCCCAACATGAAACCTCTGGCTACATCATCTTGGAGGCAGAGTACGCCGGCGAGAACGGGGGATCTCCGATCAACCCCAACGTCAACAATGAGAAGCCACGCGCTGCGCGAGAGCACGATCAGTACATGCCGATAGCGAACGTCATCAGAATCATGCGGCGGATTCTTCCGTCGCATGCTAAAATTTCCGACGAAGCAAAAGAGACCGTGCAAGAGTGCGTCTCTGAGTACATAAGCTTCATCACCAGCGAAGCTAACCACCGGTGCCGGGAGGACGGGCGTAAGACGGTGACGGCGGAGGATGTGCTGTGGGCTATAAGCAAGCTGGGCTTCGACGACTACGTGCAGCCTCTCTCCGCCTTCCTCAGTCGCTACCGTGACGGCGCTGACGGTGGCCCACTTAGGCAGCACGTGATGGCTCCGCAGTTCGCACATGCTCCTCCGCCATTGCCGCCATGTAATGGGTCGGGTTATCCGGTGGGTCTAAACCCGATGGTGATGTGTGGACACTACATGGGTAGCGGGTCGAGTTGTGTTAGTTCAAGCAGCGCTTCCACAGATCATGATCTGTATGCTTTCGTGAAGCGTGATCGTTACTGA 639 0.5634 MEGGGPFFPSGQLPQHETSGYIILEAEYAGENGGSPINPNVNNEKPRAAREHDQYMPIANVIRIMRRILPSHAKISDEAKETVQECVSEYISFITSEANHRCREDGRKTVTAEDVLWAISKLGFDDYVQPLSAFLSRYRDGADGGPLRQHVMAPQFAHAPPPLPPCNGSGYPVGLNPMVMCGHYMGSGSSCVSSSSASTDHDLYAFVKRDRY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0171 212 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Bisa09g0171 212 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Bisa09g0171 212 PRINTS CCAAT-binding transcription factor subunit A signature 121 139 - -
Bisa09g0171 212 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 56 119 IPR003958 -
Bisa09g0171 212 Gene3D Histone, subunit A 43 150 IPR009072 GO:0046982
Bisa09g0171 212 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 42 140 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa09g0171 212 SUPERFAMILY Histone-fold 53 142 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0171 Bisa-ChrBisa09 2218911 2220746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0171 41 190 CCAAT-HAP3 Transcription Factor Family AT1G21970 56.173 2.02e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa09g0171 CBFD_NFYB_HMF 6.9e-24 CL0012