Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0157 ATGAATTCAGAGTTGCTTCATCGAATTCGAAAAGTTTCCACTGTTCTTCTCAGTTTGGCTGAGTTGTCAATGGCGGACTCGGACAACGATTCCGGAGGGGCGCAGCACACTGGAGCCAATGCGAACAGCGAATTGTCGCCGCGAGAGCAGGACCGATTCCTGCCAATAGCAAACGTGAGCAGAATCATGAAGAAGGCGCTTCCGGCGAACGCGAAGATCTCGAAGGACGCGAAAGAAACGGTGCAAGAGTGCGTGTCGGAGTTCATCAGCTTCATCACCGGAGAGGCCTCCGACAAGTGCCAGAGGGAGAAGCGGAAGACCATCAACGGCGACGACTTGCTCTGGGCAATGACCACGTTGGGATTCGAGGACTACGTGGAGCCCCTCAAGATTTACTTGCAGAGGTTCAGAGAGATGGAGGGCGAGAAGAGCGTCGTGGCGGCACGTGACAGGGAAGGCGGTGGCGCGTCGAACAGCGGGTTCGATGGCGGCGGTGGCGGGGTATACGGTGGTGGTGGAGGTGGAGGTGGAGGTGGAATGGGGATGATGGTGCATCAGGGACACGTGTACGGTTCAGGTGGGTTTCATCAAATGGGTGTGAGTGGTGGTCCTGTTATGGGTAAGAGTGGGCCCAACTATCCGGGTCCTGGATCTAATGCGGGTAGACCCAGATAA 675 0.5644 MNSELLHRIRKVSTVLLSLAELSMADSDNDSGGAQHTGANANSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQRFREMEGEKSVVAARDREGGGASNSGFDGGGGGVYGGGGGGGGGGMGMMVHQGHVYGSGGFHQMGVSGGPVMGKSGPNYPGPGSNAGRPR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0157 224 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 27 148 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa09g0157 224 MobiDBLite consensus disorder prediction 148 167 - -
Bisa09g0157 224 PRINTS CCAAT-binding transcription factor subunit A signature 119 137 - -
Bisa09g0157 224 PRINTS CCAAT-binding transcription factor subunit A signature 100 118 - -
Bisa09g0157 224 PRINTS CCAAT-binding transcription factor subunit A signature 81 99 - -
Bisa09g0157 224 ProSitePatterns NF-YB/HAP3 subunit signature. 84 100 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa09g0157 224 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 53 117 IPR003958 -
Bisa09g0157 224 SUPERFAMILY Histone-fold 50 151 IPR009072 GO:0046982
Bisa09g0157 224 MobiDBLite consensus disorder prediction 28 47 - -
Bisa09g0157 224 MobiDBLite consensus disorder prediction 200 224 - -
Bisa09g0157 224 FunFam Nuclear transcription factor Y subunit B-3 42 162 - -
Bisa09g0157 224 Gene3D Histone, subunit A 41 159 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0157 Bisa-ChrBisa09 1792610 1793444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0157 24 149 CCAAT-HAP3 Transcription Factor Family AT4G14540 85.714 3.52e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa09g0157 CBFD_NFYB_HMF 2.4e-27 CL0012