Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0149 ATGTGCAGTTTCTGGGCTCTGCAAGGCGCGCACTTTTCATGTCCATGGCAATTTCAGGGATCACCATCGCCATCTTCACTGAAACTTCGCTACAAGTTTCTCCTTGTTTTTCTTTGGTTGGAACTTATCTTGCCTTCTCTTAATTGGGATATCCAGTCGTCTCTGAAAGTTTGCGCAGAAGATCATGCTTCTTCTAGGGCTTGTGAGATTGAGGAAAACATGACTAACTACTTGGATGGTACTAGCGCTATTGTCAGATTTTCTTATTGCCCTTTTGGTCATGTAAATCAAAAGGGTCCGGACCTTTTGCCTTCATTCTTTGAAATCAAGTGCTTTTCTGGTGCTCTGTTGACTCCCTTTGGTATTTTCTTTAAGATGGCTGCAAATAATCGCCGTTTCATAGAATGGAAAGAGCAGTTTATTTCGCAGGAGCGTGGCAATCGTGTGGTCCACTATTACCTAAAGGATTCTGCTGGGGAATCCATCCTTGCAGTTGTGGGCACTGAGAGGAGCCTTAGACACATGTTCTATGTTGTTGCTGAGGAGTTCCTAGCAGTTTGTGGGAAGGAGGGTGACATCCATGCTGGATTCAAATGGAGGTCCAGAAGAGAGGTGGTGGATTGGTTGACATCAATGCTATCAAAGCAGCATCTTCTGGGAGTTAAGAGTGTATCACCGAGTCATAATTTGTTGCAAGCTCATGAAACCACAGGTAACACTGTCAATGGATTCATTGATCTGCACACGCAGATATCAGATGACAAGGGTCGTCTAATGAGTAACTTCAAGGGACACAATTCTGACATTGTTTGGTCAGGAGTTGCATGGACATGTGGCAAGCAACTTAAGCATTATCCTGCTTTTTGCAGGAATGGGATCAAAATAGTGATTCAATCCTTTGTTTTTGTCATGGCCACGGGAGAGAATCATTACATCGCTTATTTAGAGGATATGTATGAAGACAGAAGGGGTCAGAAGAAGGTTAAAGTGAGGTGGTTTCATCATAATCAGGAAGTCAAGGGTGTAGTTCCCTTGAGAAATCCCCACCCTCAGGAAGTTTTTATCACATCCTATTCTCAAGTGATTAGTGCAGAGTGTGTTGATGGTCCTGCCATGGTCTTAACTCGGGAAGATTATGAAAAATGCTTGCCTGCTTTTCCCCCTGCCTCATCAGATAGAATCCATTTGTGCTTTAGGCAATTCAGGAACAACAAAGTGAAGCCCTTTGACTTGAGTAAATTGCGTGGCTACTATGATCAACCAATCCTCTCTCACTTGCACCTTGATTCCTTCCAAAACCCTAAATGCAATAACCTTGCAGAAGAAGATGAAGAGTTGAGTGCAGGTGATGTCAAACTGGAAGGTAAGAGGACCAGAAGTGGTAGGGGGTCTCCTCGGTATTTGATAGGTCACCAGGGAGTTAGGAAATTAAGTAGAAGTCAGCAAGCAATGGTATATAAAACCTTCAAGAATGGAAAATATACTAGGGCAGATAGGGGATTGCTTTCCCTAAAACAGGTTGATTGTCAGCCTTGGTATAACTGCATATATAATGTTGATGACAAGATAGAGATACTCTGTCAAGACAGTGGCATCAGAGGCTGCTGGTTCAGATGTACAGTTGTGCAGGTATCCCGGAAACAGATAAAAGTCCAATACAATGATGTGCAGGATGAAGATGGAAGCGGCAATCTTGAGGAATGGATCCCTGCTTTCAAACTGGCCATGCCTGATAAAATTGGGATGAGACATTCTGGCCGGCCCACCATCAGGCCAGCCCCAACTAACGAGGAGCAAGGAGAACTGGGTGTTGAGATTGGAACTGCAGTGGATGCATGGTGGAGTGATGGATGGTGGGAGGGGGTTGTATGTGGAATTGACAACAGCGGCGATGACAGTGTGCAGGTTTACTTTCCTGGTGAAAGCTTGCTAATGAAAGTGTGCAAGAAGGATCTAAGATTATCAAAAGATTGGTTAGGAGACCGGTGGGTTGATATTAAGCTAAAGCCTAACATAGCCTCCACCATATTTGCGGTTAATGGCACTAACACAAAGCTTTCAGTGTCCCCATCTATCACTAAAGATGTTGACTTTGTGGGGGTTGCTATTTCATGTCAAGATGCTCCCGTTACTGAGAAGTCTAATGAACTAAATATTGTTGCTGAAGATGTTAATTGGATTAATGATAACATGCTGCATTCACAAGAGAGAATTGCTCAAGTAGAAGAGACTGAGATGCTAGGCAATTGTGATAATGAGAATAATGATGATGACAGAGACGACAAGGAGAGCAATGATGGCGATTATGATAACAAAGACGGTGATAATGATGATAGGGATATGGAGGTGTTTGAGACTTCAGGAGAGGATTGCAAAACTGTTGAACTCATGGAAGTGGCTGTATAA 2406 0.4331 MCSFWALQGAHFSCPWQFQGSPSPSSLKLRYKFLLVFLWLELILPSLNWDIQSSLKVCAEDHASSRACEIEENMTNYLDGTSAIVRFSYCPFGHVNQKGPDLLPSFFEIKCFSGALLTPFGIFFKMAANNRRFIEWKEQFISQERGNRVVHYYLKDSAGESILAVVGTERSLRHMFYVVAEEFLAVCGKEGDIHAGFKWRSRREVVDWLTSMLSKQHLLGVKSVSPSHNLLQAHETTGNTVNGFIDLHTQISDDKGRLMSNFKGHNSDIVWSGVAWTCGKQLKHYPAFCRNGIKIVIQSFVFVMATGENHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVVPLRNPHPQEVFITSYSQVISAECVDGPAMVLTREDYEKCLPAFPPASSDRIHLCFRQFRNNKVKPFDLSKLRGYYDQPILSHLHLDSFQNPKCNNLAEEDEELSAGDVKLEGKRTRSGRGSPRYLIGHQGVRKLSRSQQAMVYKTFKNGKYTRADRGLLSLKQVDCQPWYNCIYNVDDKIEILCQDSGIRGCWFRCTVVQVSRKQIKVQYNDVQDEDGSGNLEEWIPAFKLAMPDKIGMRHSGRPTIRPAPTNEEQGELGVEIGTAVDAWWSDGWWEGVVCGIDNSGDDSVQVYFPGESLLMKVCKKDLRLSKDWLGDRWVDIKLKPNIASTIFAVNGTNTKLSVSPSITKDVDFVGVAISCQDAPVTEKSNELNIVAEDVNWINDNMLHSQERIAQVEETEMLGNCDNENNDDDRDDKESNDGDYDNKDGDNDDRDMEVFETSGEDCKTVELMEVAV 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0149 801 Gene3D - 261 414 IPR043151 -
Bisa09g0149 801 ProSiteProfiles BAH domain profile. 293 412 IPR001025 GO:0003682
Bisa09g0149 801 MobiDBLite consensus disorder prediction 746 790 - -
Bisa09g0149 801 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 411 764 - -
Bisa09g0149 801 SMART BAH_4 293 412 IPR001025 GO:0003682
Bisa09g0149 801 SMART agenet_At_2 602 660 IPR014002 -
Bisa09g0149 801 SMART agenet_At_2 515 580 IPR014002 -
Bisa09g0149 801 MobiDBLite consensus disorder prediction 765 790 - -
Bisa09g0149 801 CDD Tudor_Agenet_AtDUF_rpt1_3 519 594 - -
Bisa09g0149 801 MobiDBLite consensus disorder prediction 749 764 - -
Bisa09g0149 801 Pfam Agenet domain 520 594 IPR008395 -
Bisa09g0149 801 Pfam BAH domain 300 403 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0149 Bisa-ChrBisa09 1725620 1731176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0149 529 658 PHD Transcription Factor Family AT5G58610 28.571 2.15e-12 68.9