Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0142 ATGCCATCACAACACCATGGAAACGCAAGTGTTCCAAGACGTTTCGTGAGGAAATATTGGAAAGGATTATCAAACCCAGTTGTGCTGAGCCTTTCAAACGGCGATGAGTGGAAATTAGATTGGATAGAGCGTGATGGGGGTGTTTGGTTCAGAGGTCGTTGGAAAAAATTTACAGATTACTATAAAATAGTTGATGGGCATTTCTTGGTTTACAGGTACAAAGGAATTGGGTCTCATTTTCAAGTTATCATGTTTGATATGAGTGCCTCAGAAATAGACTACCCTGCTTCTGTACGAGACGTAGTTGAAATTGATGATGATGATGATGATGGTGGTCGTGAAGAGTTCCCCGAACAGGTTAAACTTGGACAAGAAATTGATGATGATGAGGAGGAGAGTGATGAAAGGCCAGTTAGATCATCTCCATCAATGTAA 435 0.4092 MPSQHHGNASVPRRFVRKYWKGLSNPVVLSLSNGDEWKLDWIERDGGVWFRGRWKKFTDYYKIVDGHFLVYRYKGIGSHFQVIMFDMSASEIDYPASVRDVVEIDDDDDDGGREEFPEQVKLGQEIDDDEEESDERPVRSSPSM 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0142 144 CDD B3_DNA 10 86 IPR003340 GO:0003677
Bisa09g0142 144 Pfam B3 DNA binding domain 5 82 IPR003340 GO:0003677
Bisa09g0142 144 Gene3D - 1 89 IPR015300 -
Bisa09g0142 144 SUPERFAMILY DNA-binding pseudobarrel domain 2 88 IPR015300 -
Bisa09g0142 144 MobiDBLite consensus disorder prediction 103 144 - -
Bisa09g0142 144 ProSiteProfiles B3 DNA-binding domain profile. 1 88 IPR003340 GO:0003677
Bisa09g0142 144 PANTHER B3 DOMAIN-CONTAINING 10 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0142 Bisa-ChrBisa09 1620025 1620962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0142 11 94 B3 DNA Binding Superfamily AT3G18990 39.286 9.13e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa09g0142 B3 2.4e-07 CL0405