Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0117 ATGCAAACCGCAAGAGCATTGAGCTTCACTCTGTTTTTAAGGAAGAATTTGCTTTTCCTTCTTCCTTTCTTCTTCGTCATGGTCTGTGCAGAAGGTGAGTCTTCAGAATCTGAGCCTTTCTTCAAGTTCATTAGAGCCATTGATCCCCAAAACGTGCTAAACATTAGCTGGATCAATAATGGGTCAGTTGAAATATCACATCCCTGTATGCTTAAGTTGAAGGGTGTGAGATGCAACTCCAAATGTACCAATATAATAGGGATAAGGTTTGAAAACTTGAACCTCAGTGGAACTATCAATGCAGATTCGCTGTGCAGGTTAAAAAATCTGAGAGTTCTGAGTTTAGCTGAGAATAACATCAAAGGAAACGTTCCAAACTCAATTATGCACTGCACTAGGTTGAGTTATCTGAATCTAACAAGCAATCAGTTGAGTGGGAGGATACCTAGAGGTCTAATGAAATTGAAATTTCTGAGGAAATTGGACCTCTCAAACAATAATTTTTCCTGGCATCGCTTTGCCTGTTCTTTGACTTCAAGCATATCAAAGAGTTACAACATAAATACCAGAAGGGGGCTAAAGGAAGAGGATAATAGTAATTCTGGTAATCGGGGATCGAAAATCTTCAAACTAGTACCTTTGGGCATTGCATTGTTGTTGCTATTGGTGTTGCTTTACTTTGCGGGCAAGAAGATAGACAAATTGAGCGCAGAAAGTGGGAAGGCGCTCAATATCCATAAGGAGTCTCAGATACGACAGGTTCCAACTGAGGTTAAGGATGAAGAACAAGAAGAAGAAGAAGACGAAGAGGTGAAGCTGAAGAAAAGAGATACAGAGCTTGTGTTCTTTGTTGAGGAGCATGAAAGGTTCACACTGGAGGACCTGCTTCAAGCCACAGCTGACTTAAGAAGTGAAAGCTTTTGCAGTAGCCTTTACAAGGTAACACTCAAGAATAATGTCCTTTATGCAGTCAAGAGACTAAAGAATTTGCAGGTATCATGTGATGACTTCAGCGAAACATTAAGGCAGATAAGCAAGTTGAAACATCCCAATATTCTTCCCCTTGTTGGTTACCGATCTACCAATGAAGAAAAACTCATCATTTACAAATATCAAAGCATTGGAAGTCTGCTAAATCTTTTTAAGGACTATCTTGAAGGTAAAAAAGATTTCCCATGGAAACTTCGGCTGTCTATAGCATGTGGGATTGCAAGGGGTTTGGCATTCATATATCGGAAGGAGGATAATCAGGAGATCACTGTTCATGGGAATCTAAAGCCATCAAATATCCTTCTCAATGACAAAAATGAACCACTAATAAGCGAGCATGGATTATCAAAATTCCTAGACCCAAATAGAGGTTTCGTCTTCTCTGCTCATGCATATACAGCTCCAGAGAAGAGTTTGTCGGAAAAAGGAGATGTTTATAGTTTTGGAGTGATCCTCCTGGAATTTTTAACAGGAAAAAGCATAGAAGTGGTTAGAATAGACCTCACTAGATGGGTTAGGTCCATGGTGAGGGAGGAATGGACAGGAGAGGTCTTTGACAAGGGGGTTAGGGAAACTGAATACCAGTGGGCATTTCCTGTGCTGAACATAGCCCTCATGTGTGTATCGCCTCTCCCTCAGAATCGGCCAACCATGGAAGAGGTTTTGGAGAAGATAGAGGAAGTAATGAATGAACAACAACAGCAGGAACACGCTGTTCCAACAAGCTGTCCTGATGGATCCAACCATGAAGATACTTGCTCGCTTCACAAAATCATACCTGATACATGGGATTCTCCAGAATCAAATTATTGA 1803 0.4071 MQTARALSFTLFLRKNLLFLLPFFFVMVCAEGESSESEPFFKFIRAIDPQNVLNISWINNGSVEISHPCMLKLKGVRCNSKCTNIIGIRFENLNLSGTINADSLCRLKNLRVLSLAENNIKGNVPNSIMHCTRLSYLNLTSNQLSGRIPRGLMKLKFLRKLDLSNNNFSWHRFACSLTSSISKSYNINTRRGLKEEDNSNSGNRGSKIFKLVPLGIALLLLLVLLYFAGKKIDKLSAESGKALNIHKESQIRQVPTEVKDEEQEEEEDEEVKLKKRDTELVFFVEEHERFTLEDLLQATADLRSESFCSSLYKVTLKNNVLYAVKRLKNLQVSCDDFSETLRQISKLKHPNILPLVGYRSTNEEKLIIYKYQSIGSLLNLFKDYLEGKKDFPWKLRLSIACGIARGLAFIYRKEDNQEITVHGNLKPSNILLNDKNEPLISEHGLSKFLDPNRGFVFSAHAYTAPEKSLSEKGDVYSFGVILLEFLTGKSIEVVRIDLTRWVRSMVREEWTGEVFDKGVRETEYQWAFPVLNIALMCVSPLPQNRPTMEEVLEKIEEVMNEQQQQEHAVPTSCPDGSNHEDTCSLHKIIPDTWDSPESNY 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0117 600 Gene3D Ribonuclease Inhibitor 36 206 IPR032675 -
Bisa09g0117 600 Coils Coil 545 568 - -
Bisa09g0117 600 ProSiteProfiles Protein kinase domain profile. 296 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0117 600 SUPERFAMILY L domain-like 51 334 - -
Bisa09g0117 600 Pfam Leucine rich repeat 98 144 IPR001611 GO:0005515
Bisa09g0117 600 Gene3D Phosphorylase Kinase; domain 1 262 371 - -
Bisa09g0117 600 Gene3D Transferase(Phosphotransferase) domain 1 374 577 - -
Bisa09g0117 600 Pfam Protein tyrosine and serine/threonine kinase 317 554 IPR001245 GO:0004672|GO:0006468
Bisa09g0117 600 SUPERFAMILY Protein kinase-like (PK-like) 309 555 IPR011009 -
Bisa09g0117 600 PANTHER OS05G0588300 PROTEIN 200 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0117 Bisa-ChrBisa09 1316737 1318997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0117 17 577 Receptor kinase-like Gene Family AT5G53320 30.569 1.00e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa09g0117 PK_Tyr_Ser-Thr 1.3e-22 CL0016