Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0095 ATGTCAGACCTAGACAGGCAGATAGAGCAGCTGAAGAAGTGTGAGCCTCTCAAGGAGTCGGAAGTGAAAGCACTTTGTCTCAAGGCCATGGAAATCCTTGTCGAAGAGAGCAATGTTCAGAGGGTCGACGCCCCCGTCACCATATGTGGCGATATCCATGGGCAGTTTTATGACATGAAAGAGCTATTTAAAGTAGGAGGCGATTGCCCCAAAACAAACTATCTATTCCTTGGGGATTTTGTTGATAGAGGATTTTACTCAGTTGAAACATTTCTACTTCTGCTGGCTCTAAAGGTGAGGTATCCAGATCGAATAACACTCATTAGGGGGAACCATGAGAGCCGTCAAATCACACAGGTATATGGATTCTATGATGAGTGCCTTCGTAAATATGGATCAGTCAATGTTTGGAGATACTGCACTGATATATTCGACTATTTAAGTCTGTCAGCTCTAATCGAAAACAAGATTTTTAGTGTTCATGGTGGTCTATCTCCTGCCTTCTCAACATTGGATCAGATACGGACTATTGATCGGAAGCAAGAAGTACCTCATGATGGTGCCATGTGTGACCTCCTATGGTCAGATCCTGAAGATATAGATGGATGGGGTCAGAGTCCCCGTGGTGCTGGTTTCTTATTTGGTGGTACTGTTGTTTCTTCTTTTAACCACTCCAATAACATTGACTATATATGCCGTGCTCATCAGTTGGTTATGGAAGGATATAAATGGATGTTCAATAACCAGATAGTTACTGTTTGGTCAGCTCCGAATTATTGCTATAGATGTGGCAATGTAGCCGCAATCCTGGAGTTGGATGAAAATCTAAACAAGCAGTTTCGCGTGTTTGATGCTGCCCCACAGGAATCAAGAGGGGCACCCGCCAAAAAACCACCCCCAGATTACTTCCTATAA 915 0.435 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAFSTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIDGWGQSPRGAGFLFGGTVVSSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDENLNKQFRVFDAAPQESRGAPAKKPPPDYFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0095 304 Pfam Calcineurin-like phosphoesterase 45 236 IPR004843 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 142 168 IPR006186 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 171 198 IPR006186 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 227 247 IPR006186 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 249 265 IPR006186 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 74 101 IPR006186 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 107 131 IPR006186 GO:0016787
Bisa09g0095 304 PRINTS Serine/threonine phosphatase family signature 45 72 IPR006186 GO:0016787
Bisa09g0095 304 ProSitePatterns Serine/threonine specific protein phosphatases signature. 108 113 IPR006186 GO:0016787
Bisa09g0095 304 SUPERFAMILY Metallo-dependent phosphatases 2 290 IPR029052 -
Bisa09g0095 304 SMART pp2a_7 17 287 IPR006186 GO:0016787
Bisa09g0095 304 Gene3D - 1 304 IPR029052 -
Bisa09g0095 304 FunFam Serine/threonine-protein phosphatase 1 304 - -
Bisa09g0095 304 CDD MPP_PP2A_PP4_PP6 3 287 - -
Bisa09g0095 304 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 2 304 IPR047129 GO:0004722
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0095 Bisa-ChrBisa09 1078887 1085799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0095 24 222 Calmodulin-binding Proteins AT5G63870 35.983 4.35e-36 129