Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0093 ATGGATTCGACGCTGGCCACTGAGGTGAAGGAACCAGCGGAGGAGTCGCACTCGGAGGGCTTGGCGGTGAAAAGGCCGGTGGAGAATGGCGGAGGTGATGAATTGGTCAAGAGGCCTAAGGTTGAGGCTGCTGCGTCCAGCGGGGAGTTGAAGAGAGTGGCGGAGATTGTGTTGGTTCTGTCGACGATGGCGGCAATTCGAGGTGGTAGGAAACCAGCTGATGTGGAGATTGAGCTGATGAAGGAGGCTAGGATGAAGTTGGTGGAGTTGTGTCAGGGCCTGGCTCCGAAGGATATTGTGGCGACGGAAGCTATAGGGACTGTGATTGAGGAGCTTGGGTTGAATGGAAAGATGAAAGACCAGAGATTAGGGTTTCAAACTACAAAAATGTCCATAGCCGAGAGGTTTTCACACACCAAGTTGAAGATGGAAGAATCAAGGAAGTTCTCTGCACATTCTGCAACACATACTTCTCAGCCATTGCAAACCAGCATTGGCGGAAGTGTTGAAAACCATGTGCCATCTCGTAATGTTCGAATATTCCCGTCGGACAAATCAAGCTCCACAGGAGTCACTTCTGCAGGTACCCCAGCTTTTACGCCCGTGATTCATGTTTCTGCAGGGTCTTCTGCGGCTTTGCAATATCAATCAACTAGCAATGAAATAAAACCATCAATAGTTACTCGTGGAAGGCCTAGCAGTCACTTGGGTAGGAATTCATCGTCATTACCGTTGCCTAAAAGTGAACAGCCACAGTTCAAAGTTGATGGAGGATCAAATGGTTCTTCTTATGTGATGCATGTACAAGCAAATTCTTCAGCAAACCAACCTTTGGTGAATGCTCCAACATGGTCAATACAGAGTCAATCTGCTTCATTAGCTAGAAATGCACCAGAAAACAAAGTGCCTGGTGATAACTCTGTCAAGGTTGAGGGGGGTGCAGCTTCGCAAATATCAAGGGATCAGAGCTTTAGACCATTTGTAACTCAAACAACAACAGGTAATTTGTCTAGCATGCATCAGCCATTGCAGGGCATGAACATTGTTCAGCCTCCTTCACTTGCTAATAGTCACACCGAAGTTGCAAAGATTGTCCAGAAATTATTACAACCAAAGCTTCCTGACCATCCCTCATGGACGCCTCCGTCAAGGGACTATATGAATAAGGCATTGACTTGCCAGATGTGTGAGCTCACGGTCAATGAAGTAGATACTGTGCTTCTTTGTGATGCTTGTGAAAAAGGGTTTCACCTGAAGTGTCTGCAGCCATCAATCTTGAGAGGAATTCCTAGAGGTGAGTGGCACTGCATGAGGTGCTTGACATTAAGTGGTGGCAAGCCTTTGCCTCCAAAATATGGTCGTGTCATGAGGTCCTCAAACACGCCACCAAAACTGCCTTCTAACACAGATGGGATCCAACCATCATTTGAAAAGAAAGCTGAAGGGTTAGATCCAAAGGTGAGCTCACAGGGGTTAACAACAAATGGGAATTCTATTTCAACTGATGCCACCGGTAACAACAAAAATGCTGAGCTACCATCTGATTCAAAGACGCCTGATGCCAAAGAAATACAAGACAATGCTTGTTCATCCAGCAGCAAACATATCGAAGAGAAGCCTGACCCAGATATTTCAGTAAGATCCCTTGGTGCAGCTACTTGTTCTTCTGTTGGCTTGCCAGGTGAAAGTTCTGATATACAAATAAATTCTGAGGCATCTACCTGTAAAGAGAGAAATCTTGCTTTAGAATCAGCAGCTCTCCCCAAATTATCCGAGTCAGATAAACTTAGTAATTTGCAAACGTTGCAAAATTTACAAGTTGAGAAATCACTGCTGCCAGACAATGCTGAAGCTTCATCAGATAAATGCATTGGCAATACTTTGACAGATAATAACAGAAAGGAATCTCATGGAGGAGAAAGTTTGACATATGATATCAAGCGGGATGACCAATTTGTTGCACTAGCAGATTCTGATATAAGTTCTGGAACTAATACTGAAGATAGACAGCATGTGGCATTATACTCAGAAGGCTCACAAATGGTAGAATGGGTTGGTGATCTTATACAACTTTTGGATGAGAAAAAGTTTTACCAATCTTGCTGTGTTGACGGAGTTACATATAGGCTGCAGGATCATGCTCTTTTTCAATCTAGCTATGGCAAGTTAACACCTTCTAAACTTCAGTCTATGTGGGAAGATAGCAAAACTGGGTTAAAATGGGTAAAAGTTACGAAGTGCTACTTTCCGGGTGATTTACCAGGGAATATTGGTCATCCATGTATATCTGAAGTCAATGAGGTATATGAATCTAATAGTGTTCGAACTGAAATGGCTGGCTCTATACGAGGCTGGTGTGAAGTCCTCCCATCCAATAAATTTAAACAAGAAAATGATAGACGAAGTCAGTTAGAAATCGAGGAAAATGCTACACTACAGCCAATTTTTCTATGCAGATGGTTCTATGATGAACACAAAAAGTTATTTCAACCTGTTACCAGTTGA 2505 0.4359 MDSTLATEVKEPAEESHSEGLAVKRPVENGGGDELVKRPKVEAAASSGELKRVAEIVLVLSTMAAIRGGRKPADVEIELMKEARMKLVELCQGLAPKDIVATEAIGTVIEELGLNGKMKDQRLGFQTTKMSIAERFSHTKLKMEESRKFSAHSATHTSQPLQTSIGGSVENHVPSRNVRIFPSDKSSSTGVTSAGTPAFTPVIHVSAGSSAALQYQSTSNEIKPSIVTRGRPSSHLGRNSSSLPLPKSEQPQFKVDGGSNGSSYVMHVQANSSANQPLVNAPTWSIQSQSASLARNAPENKVPGDNSVKVEGGAASQISRDQSFRPFVTQTTTGNLSSMHQPLQGMNIVQPPSLANSHTEVAKIVQKLLQPKLPDHPSWTPPSRDYMNKALTCQMCELTVNEVDTVLLCDACEKGFHLKCLQPSILRGIPRGEWHCMRCLTLSGGKPLPPKYGRVMRSSNTPPKLPSNTDGIQPSFEKKAEGLDPKVSSQGLTTNGNSISTDATGNNKNAELPSDSKTPDAKEIQDNACSSSSKHIEEKPDPDISVRSLGAATCSSVGLPGESSDIQINSEASTCKERNLALESAALPKLSESDKLSNLQTLQNLQVEKSLLPDNAEASSDKCIGNTLTDNNRKESHGGESLTYDIKRDDQFVALADSDISSGTNTEDRQHVALYSEGSQMVEWVGDLIQLLDEKKFYQSCCVDGVTYRLQDHALFQSSYGKLTPSKLQSMWEDSKTGLKWVKVTKCYFPGDLPGNIGHPCISEVNEVYESNSVRTEMAGSIRGWCEVLPSNKFKQENDRRSQLEIEENATLQPIFLCRWFYDEHKKLFQPVTS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0093 834 CDD BAH 705 833 - -
Bisa09g0093 834 MobiDBLite consensus disorder prediction 617 641 - -
Bisa09g0093 834 MobiDBLite consensus disorder prediction 7 22 - -
Bisa09g0093 834 ProSiteProfiles BAH domain profile. 706 833 IPR001025 GO:0003682
Bisa09g0093 834 MobiDBLite consensus disorder prediction 1 34 - -
Bisa09g0093 834 Gene3D - 685 834 IPR043151 -
Bisa09g0093 834 MobiDBLite consensus disorder prediction 460 474 - -
Bisa09g0093 834 MobiDBLite consensus disorder prediction 487 514 - -
Bisa09g0093 834 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 1 833 - -
Bisa09g0093 834 Pfam PHD-finger 393 440 IPR019787 -
Bisa09g0093 834 MobiDBLite consensus disorder prediction 223 261 - -
Bisa09g0093 834 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 345 446 IPR013083 -
Bisa09g0093 834 ProSitePatterns Zinc finger PHD-type signature. 393 439 IPR019786 -
Bisa09g0093 834 MobiDBLite consensus disorder prediction 450 545 - -
Bisa09g0093 834 SMART PHD_3 392 440 IPR001965 -
Bisa09g0093 834 ProSiteProfiles Zinc finger PHD-type profile. 390 442 IPR019787 -
Bisa09g0093 834 SUPERFAMILY FYVE/PHD zinc finger 384 447 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0093 Bisa-ChrBisa09 1038525 1043028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0093 392 440 C2H2 Transcription Factor Family AT3G01460 40.816 4.99e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bisa09g0093 PHD 1.4e-08 CL0390