Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0069 ATGGCTAGCGAAGAGGAGAGGCTTCTGGAGACGCAACTGGAGCATCAATTGCAAGAGCAGAAGGATTCACTCTCTGCTCTGAATCAAGCTTTGGCCTCTGATCCAAACAATCCCGAGATTCTCGCGGTTCATGAGGAGCTTGTTCAGGCTATCAAGGATGCAGAGGAAGGGCTTCTTCACTTAAAACGTGCTCGTTTATTACAAGAAGCAGATTCCGTGCTGCATAACTCCAATCTTTTTGCTGAAGAAGATAAAGTAGAGCCACTTGACCCCACTGATGTTGAACCAGAACCACTAGAGGAACAACACTATTCTGTTGGATCTAAATGCAGATTCCGTCACACTGATGGGCGTTGGTACAATGGTCAAGTAGTGCAGTTGGATAATTCATCAGCAAAGATTTCATTTCTTACTCCTACTTCTGAGAATATGCTGATGTGCAAGTTCTTTCTACAACAACGATGTCGGTTTGGTACTAACTGTCGCCTATCTCATGGAATTGATGTTCCACTGTCCTCGCTCAGAAAGTATGTCCCTACTATCTGGAAGCAATCTTTGGTTGGTTCATGTATATGGGCAGTCTCAGATATTAATGCTGGGATTTGGAAGGAAGCTGAGCTTGAATCTTGGGACGAAGAACTTGGAGTTGGAGAAGTTGTTTTCAGAGATGATGGAAGTTTTATGAAGCTAGGGGCAGAAGCTATAGCATTATCCGAGTATGCAGAAGCAAGCAGTGAAGAGAGTGATTCGAGCTCAGAACAATCTGATTCTAGTGACTATGAAGATGATGGTCCACAAGGTTTAGGCTTCCTGGAAAGTACCAACCTTCAGCGGGGAATTCAGACTGGAACTGCTGTATTTGCTAAGTGGGAGAACCACACTAGGGGTGTGGCTTCCAAAATGATGGCTAATATGGGTTATCGTGAAGGTATGGGTTTAGGCGTATCTGGTCAGGGAATGGTAAATCCCATCCCAGTGAAGGTCCTCCCACCAAAGCAATCCTTAGATCATGCTCTTGAATCTCATAAAGGAGAAGAGAGCAAAGAGAATCAAGGTAAGAAACGAAGCAGGGGAGGTAAGAGAAAACGCCATAAGAAATTTGCAGAGGCAATTCGTGCGGCAAAAGAGGAAGAGGAATCGGTGTCAGATGTCTTTTCACTAATAAATAGACAGTTGGCAATGCATGGTGTAGCTTTAAATGGTGGATCAATGAAGAAGCAGCAAAATAAAGATTCAGGAGAAGGTAAAAAAGTTGATAGGCGAGCTTTGGTGGGTTATGAGGATGAGGTGAAGGACTTGAAGATGCGAGTTGAGAAGCTTGAAGTAATGGTGAATAGAAACAGAAAAGAGAAGGTAGTTTATGAGGCTGCTAAGAGAAAACTAATTGAAACCCGCAAGGCTTTGGCAGAGGCTGAAGCAGCTCACGCGTCAGCATCAAATGCAATTGTTGGCAAGGAAAAAGAGAAGAGATGGTTAAAGTTTTAG 1485 0.437 MASEEERLLETQLEHQLQEQKDSLSALNQALASDPNNPEILAVHEELVQAIKDAEEGLLHLKRARLLQEADSVLHNSNLFAEEDKVEPLDPTDVEPEPLEEQHYSVGSKCRFRHTDGRWYNGQVVQLDNSSAKISFLTPTSENMLMCKFFLQQRCRFGTNCRLSHGIDVPLSSLRKYVPTIWKQSLVGSCIWAVSDINAGIWKEAELESWDEELGVGEVVFRDDGSFMKLGAEAIALSEYAEASSEESDSSSEQSDSSDYEDDGPQGLGFLESTNLQRGIQTGTAVFAKWENHTRGVASKMMANMGYREGMGLGVSGQGMVNPIPVKVLPPKQSLDHALESHKGEESKENQGKKRSRGGKRKRHKKFAEAIRAAKEEEESVSDVFSLINRQLAMHGVALNGGSMKKQQNKDSGEGKKVDRRALVGYEDEVKDLKMRVEKLEVMVNRNRKEKVVYEAAKRKLIETRKALAEAEAAHASASNAIVGKEKEKRWLKF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0069 494 MobiDBLite consensus disorder prediction 339 353 - -
Bisa09g0069 494 Coils Coil 454 488 - -
Bisa09g0069 494 SUPERFAMILY CCCH zinc finger 142 166 IPR036855 GO:0046872
Bisa09g0069 494 MobiDBLite consensus disorder prediction 339 365 - -
Bisa09g0069 494 MobiDBLite consensus disorder prediction 1 17 - -
Bisa09g0069 494 SMART G-patch_5 292 338 IPR000467 GO:0003676
Bisa09g0069 494 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22 1 494 - -
Bisa09g0069 494 Coils Coil 44 64 - -
Bisa09g0069 494 Gene3D - 106 178 - -
Bisa09g0069 494 MobiDBLite consensus disorder prediction 1 31 - -
Bisa09g0069 494 ProSiteProfiles Zinc finger C3H1-type profile. 141 168 IPR000571 GO:0046872
Bisa09g0069 494 MobiDBLite consensus disorder prediction 240 274 - -
Bisa09g0069 494 ProSiteProfiles G-patch domain profile. 294 340 IPR000467 GO:0003676
Bisa09g0069 494 Coils Coil 423 450 - -
Bisa09g0069 494 Pfam CCCH-type zinc finger 146 166 IPR041367 -
Bisa09g0069 494 Coils Coil 1 30 - -
Bisa09g0069 494 Pfam G-patch domain 294 336 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0069 Bisa-ChrBisa09 733011 738371 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa09g0069 G-patch 1.9e-12 CL0449