Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0031 ATGGGTCTCTGTTTCAGCAAGGGCAGAGAATCAGAGGGACAGTACAATGGGTACAGATCAACTGGGGATACTGGATTTCACAATCAGAAAACACACGAACCCTATGTGAAGCAATCGAATCCCCCTTCTCATCCACCTTACCAATTGCCTGAAAAGCCCGTTGTTCGACCTTCTCCCAGTCCAAACAAGCACGTTCGTAAGCCCGATTCGATTCTCGGGAAGCCATATGAAGACGTCAAGCAGTTCTATACAATTGGGAAAGAGCTGGGCAGGGGTCAATTTGGAGTCACCTATCTCTGCACTGAGAATTCAACTGGTAGACCCTACGCTTGTAAGTCAATTTCGAAGAGGAAGCTTGTGAGCAAAACTGATAAGGAGGATATGAAGAGGGAGATTCGGATTATGCAGCATATGAGCGGGCAGCCCAATATTGTGGAGTTCAAAGGTGCTTATGAGGATAGTCAGTCGGTTCATCTGGTGATGGAGCTGTGTGCAGGTGGGGAGCTCTTTGATCGGATCATCGCCAAGGGGCATTATAGCGAAAGGGCTGCTGCGTCTATATGCAGGCAGATTGTTAACGTTGTTCATATCTGCCACTTTATGGGGGTGATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTGTCCAGTAAGGATGAACATGCACTTCTCAAAGCCACAGATTTCGGTTTGTCTGTTTTTATCGAAGAAGGGAAGGTTTATCGTGATATAGTTGGGAGTGCTTATTACGTTGCTCCTGAAGTTCTACGTCGCAGATATGGGAAGGAAATTGATATATGGAGTGCAGGAGTGATATTGTATATCCTTCTCAGTGGAGTACCTCCATTTTGGGCTGAAACGGAAAAGGGAATATTTGATGCCGTATTGGAAGGTCATATTGATTTTGACAGTCAGCCATGGCCAAGCATATCAAACAGTGCCAAGGACCTTGTTCGTAAGATGCTGACACAGGACCCGGAGAAACGCATTACTTCTGCTCAGGTTCTAGAGCACCCATGGATCAGAGAGGATGGAAATGCTTCTGACAAGCCAATAGATAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTAAAGAAACTTGCCCTGAAGGTCATTGCGGAAAATCTTTCTGAAGAAGAGATCCAAGGGTTGAAGGCAATGTTTACAAACATTGACACTGACAAAAGTGGTACGATCACCTACGAGGAACTAAAGGCAGGATTGCAAAGACTCGGGTCAAAGCTCACGGAGGCTGAAGTACAGCAGCTTATGGAAGCTGCTGATGTGGATGGAAATGGCACGATTGACTACATAGAGTTCATTACTGCTACAATGCATAGACATAGACTAGAAAGAGATGAGCATCTTTTCAAGGCCTTCCAGTATTTCGACAAAGATAATAGTGGGTTCATTACGAGAGATGAACTTGAAACAGCCATGAAAGAATATGGCATGGGCGATGAAGCCACAATCAGGGAAATCATATCTGAAGTTGACACTGATAATGATGGTAGAATTAACTATGAAGAATTCTGTACAATGATGAGGAGTGGAACCCAACAAGGCAAGTTATTCTGA 1593 0.4444 MGLCFSKGRESEGQYNGYRSTGDTGFHNQKTHEPYVKQSNPPSHPPYQLPEKPVVRPSPSPNKHVRKPDSILGKPYEDVKQFYTIGKELGRGQFGVTYLCTENSTGRPYACKSISKRKLVSKTDKEDMKREIRIMQHMSGQPNIVEFKGAYEDSQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEHALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAVLEGHIDFDSQPWPSISNSAKDLVRKMLTQDPEKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNIDTDKSGTITYEELKAGLQRLGSKLTEAEVQQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLFKAFQYFDKDNSGFITRDELETAMKEYGMGDEATIREIISEVDTDNDGRINYEEFCTMMRSGTQQGKLF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0031 530 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Bisa09g0031 530 SUPERFAMILY EF-hand 380 520 IPR011992 -
Bisa09g0031 530 MobiDBLite consensus disorder prediction 13 38 - -
Bisa09g0031 530 FunFam Calcium-dependent protein kinase 1 85 168 - -
Bisa09g0031 530 ProSiteProfiles Protein kinase domain profile. 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0031 530 Gene3D Phosphorylase Kinase; domain 1 84 168 - -
Bisa09g0031 530 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Bisa09g0031 530 Pfam Protein kinase domain 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0031 530 MobiDBLite consensus disorder prediction 1 71 - -
Bisa09g0031 530 Coils Coil 406 426 - -
Bisa09g0031 530 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Bisa09g0031 530 Gene3D - 350 525 - -
Bisa09g0031 530 MobiDBLite consensus disorder prediction 39 57 - -
Bisa09g0031 530 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Bisa09g0031 530 SUPERFAMILY Protein kinase-like (PK-like) 82 348 IPR011009 -
Bisa09g0031 530 FunFam Calcium-dependent protein kinase 1 349 524 - -
Bisa09g0031 530 SMART efh_1 460 488 IPR002048 GO:0005509
Bisa09g0031 530 SMART efh_1 424 452 IPR002048 GO:0005509
Bisa09g0031 530 SMART efh_1 495 523 IPR002048 GO:0005509
Bisa09g0031 530 SMART efh_1 388 416 IPR002048 GO:0005509
Bisa09g0031 530 FunFam calcium-dependent protein kinase 1 169 348 - -
Bisa09g0031 530 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Bisa09g0031 530 CDD STKc_CAMK 82 340 - -
Bisa09g0031 530 ProSiteProfiles EF-hand calcium-binding domain profile. 492 526 IPR002048 GO:0005509
Bisa09g0031 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 77 516 - -
Bisa09g0031 530 CDD EFh 389 448 IPR002048 GO:0005509
Bisa09g0031 530 Pfam EF-hand domain pair 459 521 IPR002048 GO:0005509
Bisa09g0031 530 Pfam EF-hand domain pair 389 449 IPR002048 GO:0005509
Bisa09g0031 530 CDD EFh 460 521 IPR002048 GO:0005509
Bisa09g0031 530 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Bisa09g0031 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bisa09g0031 530 SMART serkin_6 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0031 530 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Bisa09g0031 530 Gene3D Transferase(Phosphotransferase) domain 1 169 349 - -
Bisa09g0031 530 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0031 Bisa-ChrBisa09 390822 394745 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0031 1 530 EF-hand Containing Proteins AT3G20410 74.955 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa09g0031 Pkinase 1.9e-75 CL0016