Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0028 ATGGGAGGCGGTGTAGCTGCTAGTGATTGTTCCAAGGATTCAAGCGTTTCTGTAATATCCTCTTTCAATTCCAACATGTCTGTTTCTCAGAATTCAAGGTGGAAGGAGATTGGTTGTGTGTGTGTTGAGATGTTGAAGAAAGCCAGTGACAGACTTGTTGTTGCTGCATTTACCATCATTCTGGCTCTGGGATGTATAATTGGGACAGTAATGGGAGGCATTAAGGGTCACACCACAGAAGCAGGTATTGCTGATGGAGCTGGCAAAGGAGCTGTGGCAGGGGCCATTGCAGCCATACAATTGCTGGATGATCATCATCATCACCCATTCTCCAAGCTTCTACTGTTGAGCAGTGTATTTAATGGGAAGGTCCTTGTGGAATGGGTTTATCCAGCCTATCAGTGGCATATTGGAACACCAGAAGCAATATACAGAGAAGTATCGGATATTTTTGATGTGAGAGGAGTCGCTGGGCTGTCCCATAATTTTATTCACAACCTGCCTCTGCATCAATTCAACTCCACCAAAATGTTAACATTCTACAATCAATCCTGCTGCTCAGTTTGCTTCCAGGAGTTTGAGGAAGGAGAGGAGGTGAGGCTACTTCCCAAATGTGACCACATATTTCACTTTCACTGCATTCACAAATGGCTAATCCAACAAGGATCTTGTCCCAACTGCAGAACTTGTGTTGCTCCTCTTTTTCATGAATAA 714 0.4412 MGGGVAASDCSKDSSVSVISSFNSNMSVSQNSRWKEIGCVCVEMLKKASDRLVVAAFTIILALGCIIGTVMGGIKGHTTEAGIADGAGKGAVAGAIAAIQLLDDHHHHPFSKLLLLSSVFNGKVLVEWVYPAYQWHIGTPEAIYREVSDIFDVRGVAGLSHNFIHNLPLHQFNSTKMLTFYNQSCCSVCFQEFEEGEEVRLLPKCDHIFHFHCIHKWLIQQGSCPNCRTCVAPLFHE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0028 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 233 IPR013083 -
Bisa09g0028 237 SMART ring_2 186 227 IPR001841 -
Bisa09g0028 237 Pfam Ring finger domain 186 228 IPR001841 -
Bisa09g0028 237 ProSiteProfiles Zinc finger RING-type profile. 186 228 IPR001841 -
Bisa09g0028 237 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 38 230 IPR044523 -
Bisa09g0028 237 SUPERFAMILY RING/U-box 185 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0028 Bisa-ChrBisa09 372242 373310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0028 52 228 C3H Transcription Factor Family AT5G66070 33.166 1.17e-28 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa09g0028 09 372242 373310 Bisa09g0028 09 372242 373310 ECH