Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa09g0026 ATGGGTCTCTGTTTCAGCAAGGGCAGAAAATCAGAGGGACAGTACAATGGGTACAGATCAACTCGGGATACTGGATTTCACAATCAGAAAACACACGAACCCTATGCGAAGCAACCGAATCTCCCTTCTCATCTACCTTACCAATTGCCTGAAAAGCCCGCGGTTCGACCTTCTCCCAGTCCCAACAAGCCCGTTCGTAAGCCCGATTCGATTCTCGGGAAGCCATATGAAGATGTGAAGCAGTTCTATACAATTGGGAAAGAACTGGGCAGGGGTCAATTTGGAGTGACCTATCTCTGCACTGAGAATTCAACTGGTAGACCCTACTCTTGCAAGTCAATTTCCAAGAGGAAGCTTTTGAGCAAAACTGATAAGGAGGATGTGAAGAGGGAGATTCAGATTATGGAGCACATGAGTGGGCAGCCCAATATTGTGGAGCTCAAAGGTGCTTATGAGGATAGTCAGTCGGTTCATCTGGTGATGGAGCTGTGTGCAGGTGGGGAGCTCTTTGATCGGATCATCGCCAAGGGGCATTATAGCGAAAGGGCTGCTGCGTCTATATGCAGGCAGATTGTTAACGTTGTTCATATCTGCCACTTTATGGGGGTGATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTGTCCAGTAAGGATGAACATGCACTTCTCAAAGCCACAGATTTCGGTGGGTCTGTTTTTATCGAAGAAGGAAAGGTTTATCGTGATATAGTTGGGAGTGCTTATTACGTTGCTCCTGAAGTTCTACGTCGCAGATATGGGAAGGAAATTGATATATGGAGTGCAGGAGTGATATTGTATATCATTCTCAGCGGAGTACCTCCATTTTGGGCTGAAACGGAAAAGGGAATATTTGATGCCGTATTGGAAGGTCATATTGATTTTGACAGTCAGCCATGGCCAAGCATATCAAACAGTGCCAAGGACCTTGTTCGTAAGATGCTGACACAGGACCCGAAGAAACGCATTACTTCTGCTCAGGTTCTAGAGCACCCATGGATCAGAGAGGATGGAAATGCTTCTGACAAGCCAATAGATAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCAATGAATAAACTAAAGAAACTTGCCCTGAAGGTCATTGCGGAAAATCTTTCTCATGAAGAGATCCAAGGGTTGAAGGCAATGTTTACAAACATCGACACTGACAGAAGTGGTACAATCACCTACGAGGAACTTAAGTCGGGATTGCAAAGACTCGGGTCAAAGCTCACAGAAGCTGAAGTACAGCAGCTTATGGAAGCTGCTGATGTGAATGGAAATGGCACGATTGACTACATAGAGTTCATTACTGCTACAATGCATAGACATAGACTAGAAAGAGATGAGCATCTTTACAAGGCCTTCCAGTATTTCGACAAAGATAATAGTGGGTTCATTACGGGAGATGAACTTGAAAGAGCCATGAAAGGATATGGCATGGGCAATGAAGCCACAATCAGGGAAATCATATCTGAAGTTGACACTGATAATGATGGTAGAATTAGCTATGAAGAATTCTGTACAATGATGAGGAGTTGA 1569 0.4449 MGLCFSKGRKSEGQYNGYRSTRDTGFHNQKTHEPYAKQPNLPSHLPYQLPEKPAVRPSPSPNKPVRKPDSILGKPYEDVKQFYTIGKELGRGQFGVTYLCTENSTGRPYSCKSISKRKLLSKTDKEDVKREIQIMEHMSGQPNIVELKGAYEDSQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDEHALLKATDFGGSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEIDIWSAGVILYIILSGVPPFWAETEKGIFDAVLEGHIDFDSQPWPSISNSAKDLVRKMLTQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSHEEIQGLKAMFTNIDTDRSGTITYEELKSGLQRLGSKLTEAEVQQLMEAADVNGNGTIDYIEFITATMHRHRLERDEHLYKAFQYFDKDNSGFITGDELERAMKGYGMGNEATIREIISEVDTDNDGRISYEEFCTMMRS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa09g0026 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 77 516 - -
Bisa09g0026 522 CDD EFh 463 521 IPR002048 GO:0005509
Bisa09g0026 522 ProSiteProfiles Protein kinase domain profile. 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0026 522 ProSiteProfiles EF-hand calcium-binding domain profile. 493 522 IPR002048 GO:0005509
Bisa09g0026 522 SMART efh_1 495 522 IPR002048 GO:0005509
Bisa09g0026 522 SMART efh_1 460 488 IPR002048 GO:0005509
Bisa09g0026 522 SMART efh_1 424 452 IPR002048 GO:0005509
Bisa09g0026 522 SMART efh_1 388 416 IPR002048 GO:0005509
Bisa09g0026 522 SUPERFAMILY EF-hand 380 520 IPR011992 -
Bisa09g0026 522 FunFam Calcium-dependent protein kinase 1 349 522 - -
Bisa09g0026 522 FunFam calcium-dependent protein kinase 1 169 348 - -
Bisa09g0026 522 SUPERFAMILY Protein kinase-like (PK-like) 67 363 IPR011009 -
Bisa09g0026 522 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Bisa09g0026 522 Gene3D - 350 522 - -
Bisa09g0026 522 SMART serkin_6 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0026 522 Coils Coil 406 426 - -
Bisa09g0026 522 FunFam Calcium-dependent protein kinase 1 85 168 - -
Bisa09g0026 522 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Bisa09g0026 522 Pfam EF-hand domain pair 459 521 IPR002048 GO:0005509
Bisa09g0026 522 Pfam EF-hand domain pair 389 449 IPR002048 GO:0005509
Bisa09g0026 522 ProSiteProfiles EF-hand calcium-binding domain profile. 456 491 IPR002048 GO:0005509
Bisa09g0026 522 ProSitePatterns EF-hand calcium-binding domain. 469 481 IPR018247 -
Bisa09g0026 522 Gene3D Transferase(Phosphotransferase) domain 1 169 349 - -
Bisa09g0026 522 CDD STKc_CAMK 82 340 - -
Bisa09g0026 522 MobiDBLite consensus disorder prediction 1 72 - -
Bisa09g0026 522 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Bisa09g0026 522 Gene3D Phosphorylase Kinase; domain 1 84 168 - -
Bisa09g0026 522 Pfam Protein kinase domain 83 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa09g0026 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Bisa09g0026 522 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Bisa09g0026 522 ProSitePatterns EF-hand calcium-binding domain. 433 445 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa09g0026 Bisa-ChrBisa09 347701 351544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa09g0026 1 522 EF-hand Containing Proteins AT3G20410 74.170 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa09g0026 Pkinase 2.9e-73 CL0016