Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2795 ATGGGTTCGGCATCTGATAAATGCCATGCTTCGTCTTTCTGTATAGCGTCTGAGATTTGCGGCTCTATACGTGCTCTAATGGGCAAAAAAAGATATACTCTCTCTTATTATACAAGGGAGTTATTTACTGTGCTCCTGCTCTTGTTATTTAGCTTACACCACACCTGTGTTGAGTGCCAGGGCAGGTCGAGTAAGCAGAACTCTTCAGAATCGGACGCAGAAGCTCCATCTATGCCTTCACAATACAAGGATGGCCTCCGCAAGATAATCATTAGCGTTGTTTTAGGAGCTGTATCTGGATTAGTTGGCTCCGCTTTGTTTGCACTTATAGTTCGATGCTTTGTTCAGTATTTGAACCGGACCCCAATTCTCAAGGGCCCCGTCATATTTTCCCCAAAAATTGCTCCCAAGACACTTCAATCAGCTCTGGCGAAAGAAAACCATTTACTGGGTTCAAGCCTCAACGGCAAGTGTTACAGAACAGTGCTTGACAACGGGCTCACTATTGCAGTAAAGAGGCTAACCCCCTTTGAAAGCGGTTCGCCAGAGACTAGAAAAAAATCGGTGAAGAGGCAGATACAGAAGGAGCTGGAAGTGCTCGCCAGCCTGAGACATCGGAATTTGATGAGCTTGAGGGCTTATGTTCGTGAAGCTGACAGATTTTCGCTGGTTTATGATTATGTAGCCAAGGGGAGCCTGGCGGATGCAATGAGCAGAATTAGGGAAAATGAGTTGCAGCTTGGGTGGGAGGTTCGGCTTCGGATTGCCGTTGGTGTGGTTAAGGGGCTTCAGTTTCTTCACTCCACTTGCGTGCCTCAGATTCTGCACTACAACTTGAAGCCCGCCAATGTGATGTTGGATGCAGAGTTTGAGCCCAGGTTGGCAGATTATGGATTGCTTAAGCTTATGCCCAATTTGGACAGAGCCACATCTTATACTCCTCCTGAATGCTTCCATAACTGCAGCAGGTACACAGATAAAAGTGACATATTCAGTTTTGGTATGATACTGGGGGTACTGCTAACTGGTAGGGACCCAGGGGATGCATTGTTTGGAGAAGCAGTGAGTGGGGGGAGTATGGGATGTTGGCTAAGGCAGTTGCAGCAAGCAGGGGAGGCAAGGGAAGCTCTGGATAAGAGTCTAATGGGAGAAGAAGGCGACGAAGACGATATGCTTATGGCCGTTAGAGTTGCCGCAGCATGCCTCTCTGATATGCCCGCAGACAGGCCTTCCAGTGATGATCTTGTACACATGCTAACCCAACTTCACAGTTTTTGA 1278 0.4757 MGSASDKCHASSFCIASEICGSIRALMGKKRYTLSYYTRELFTVLLLLLFSLHHTCVECQGRSSKQNSSESDAEAPSMPSQYKDGLRKIIISVVLGAVSGLVGSALFALIVRCFVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSLNGKCYRTVLDNGLTIAVKRLTPFESGSPETRKKSVKRQIQKELEVLASLRHRNLMSLRAYVREADRFSLVYDYVAKGSLADAMSRIRENELQLGWEVRLRIAVGVVKGLQFLHSTCVPQILHYNLKPANVMLDAEFEPRLADYGLLKLMPNLDRATSYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGRDPGDALFGEAVSGGSMGCWLRQLQQAGEAREALDKSLMGEEGDEDDMLMAVRVAAACLSDMPADRPSSDDLVHMLTQLHSF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2795 425 Gene3D Phosphorylase Kinase; domain 1 133 227 - -
Bisa08g2795 425 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 59 421 - -
Bisa08g2795 425 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 228 424 - -
Bisa08g2795 425 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 136 227 - -
Bisa08g2795 425 SUPERFAMILY Protein kinase-like (PK-like) 148 419 IPR011009 -
Bisa08g2795 425 ProSiteProfiles Protein kinase domain profile. 144 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2795 425 Gene3D Transferase(Phosphotransferase) domain 1 228 424 - -
Bisa08g2795 425 Pfam Protein kinase domain 146 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2795 Bisa-ChrBisa08 63628270 63629967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2795 90 422 Receptor kinase-like Gene Family AT2G31880 33.521 6.28e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Bisa08g2795 Pkinase 8.5e-30 CL0016