Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2771 ATGGGCTGTTTTTCGTGTTTCGATTCCAAGGAGGACGAGAAGCTCAATCCTCAGCAGGAAACCGATGATCGTAAGCAACCCAATCCGGCCGCCCCATCTCACATTTCCAGATTGCCCTCTGGAGCAGACAAGCTCCGCTCAAGAAGTAATGGAGGATCCAAAAGGGAACTGCCTACACCTAAGGATGTGCCTGGTGTTCAAATTGCTGCTCAAACTTTTACTTTTCGTGAACTTGCCGCTGCAACTAAGAACTTTAGGCCAGAGTCTTTTATAGGGGAAGGTGGTTTCGGAAGGGTGTATAAAGGGCGCCTGGAAAGCACGGGTCAGGTTGTTGCCGTTAAACAGTTAGATAGAAATGGTCTTCAGGGTAATAGGGAATTCCTGGTGGAGGTTCTCATGCTTAGTCTTCTACATCACCCTAACCTTGTGAATCTTATTGGTTACTGTGCTGATGGGGACCAACGCCTCCTTGTTTATGAATTTATGCCATTAGGATCACTGGAAGACCACCTCCATGATCTTCCCCCCGATAAGGAACCACTAGATTGGAACACTAGGATGAAGATAGCAGCGGGTGCAGCAAAAGGATTGGAATACTTGCATGACAAGGCAAATCCCCCTGTCATTTATAGGGACTTCAAGTCATCTAATATATTACTAGATGAAGGATTTCATCCAAAACTTTCTGACTTTGGTCTTGCAAAGCTTGGTCCAGTTGGTGATAAGTCACACGTTTCCACCCGAGTTATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAACTGACTGTGAAGTCTGACGTCTATAGTTTCGGGGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGATAGCAGCCGGCCTCACGGAGAACAGAACCTTGTTACATGGGCACGTCCGCTGTTCAATGACCGCAGGAAGTTTTCGAAGTTAGCAGATCCGCGGCTGCAGGGGCGGTATCCCATGCGGGGTCTTTACCAGGCATTAGCGGTGGCATCAATGTGCATTCAGGAACAGGCTGCCACACGACCTCTGATAGGAGATGTGGTGACGGCTCTGTCTTATCTGGCGAACCAGGCATATGACCCTAATGTATCTGGGCACGGTTATAGGGGATCTGGTGAAGATAGAAGGAACAGAGATGACAGAGGTGGAAGGATATCAAGAAATGAGGAAGCGGGAGGATCTGGGCACAGATGGGACCTGGAAGGGTCGGAGAAAGAAGATTCACCGCGAGAAACTGCAAGGATGCTAAACAGGGATCTAGATAGGGAACGTGCAGTGGCAGAAGCCAAAATGTGGGGAGAGAACTTGAGAGAAAAAAGACGGCAAGGTGTGCAGGGCAGTTTTGATGCTTCTAACGCTTCTTAG 1389 0.4838 MGCFSCFDSKEDEKLNPQQETDDRKQPNPAAPSHISRLPSGADKLRSRSNGGSKRELPTPKDVPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSSRPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNVSGHGYRGSGEDRRNRDDRGGRISRNEEAGGSGHRWDLEGSEKEDSPRETARMLNRDLDRERAVAEAKMWGENLREKRRQGVQGSFDASNAS 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2771 462 FunFam Serine/threonine-protein kinase PBS1 162 375 - -
Bisa08g2771 462 MobiDBLite consensus disorder prediction 1 63 - -
Bisa08g2771 462 FunFam Serine/threonine-protein kinase PBS1 59 161 - -
Bisa08g2771 462 SUPERFAMILY Protein kinase-like (PK-like) 69 357 IPR011009 -
Bisa08g2771 462 Gene3D Transferase(Phosphotransferase) domain 1 162 373 - -
Bisa08g2771 462 MobiDBLite consensus disorder prediction 441 462 - -
Bisa08g2771 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bisa08g2771 462 MobiDBLite consensus disorder prediction 370 429 - -
Bisa08g2771 462 Pfam Protein kinase domain 88 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2771 462 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2771 462 PANTHER OS07G0668900 PROTEIN 3 370 - -
Bisa08g2771 462 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Bisa08g2771 462 MobiDBLite consensus disorder prediction 377 429 - -
Bisa08g2771 462 CDD STKc_IRAK 91 359 - -
Bisa08g2771 462 Gene3D Phosphorylase Kinase; domain 1 52 161 - -
Bisa08g2771 462 MobiDBLite consensus disorder prediction 7 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2771 Bisa-ChrBisa08 63356522 63361516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2771 1 362 Glycoside Hydrolase AT3G07070 63.978 3.19e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bisa08g2771 Pkinase 3.6e-45 CL0016