Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2754 ATGAATGGGAATGGAGTATTTGCAATGGAGTCTGCAAAATCTGGATCAGTTAAGAGAAGCCGAACACCAAACAGTGGAATCCAAGTAGCTTCGTGTTTGGTTGATGGTTGCAACTCAGACCTCGGTAAATGCAGAGACTACCACAGACGGCACAAGGTCTGTGAATTTCACTCTAAGACCCCGAAGGTCATAGTTAAGGGTCAGGAACAACGCTTCTGCCAGCAGTGCAGCAGGTTCCATTCACTGGAGGAGTTTGACGAAGGAAAGAGAAGCTGCAGGAAACGACTTGATGGGCACAACAGACGCAGGAGAAAGCCTCAACCTGAACCCTTACACATAACATCTGCAAGATTATTTTCTCAATACCAAGGTACCAAAATTCTAGCTTTCGATCATCAACAAATACTTCCCTCAGGTCCTGTTTTGAACTGTGGTTGGGGTGGTGGCCCTGCTAAGTCTGAAACTGACTATGTGGCCTTCAAGTTTGATAGCAGAAATGGGTGTAATGGTGAATCCTTGAGTAATCAGGGACAAAGGCAAAGACAGTTTCCATTTCTTCATGGATATTCTGCTTCTGCTTCTGCAAGTGAACTGAATCAAAATCCCAACTTTACATCAGAAAATGGAGGCATCAGCCAGAAAGCGTTCTCCAACTGTGCTCGCTCTCTTCTGTCATCATCTTCACCACTTGAGACTCGTGACGTTGGGTTCAGGCACATGAACATGCGTCCAAATGCTGTCCCTCCACCTCTGCACTTTGATGCTTACAATACTAACATTGATCGTACCAACCTTGACTGCGAGGCTATGTTTCACATTGGGTCTGATGCCTCGTCTTCGAATGGTGCTCACCAAAGACTGTTCTCGTGGGAGTAG 876 0.46 MNGNGVFAMESAKSGSVKRSRTPNSGIQVASCLVDGCNSDLGKCRDYHRRHKVCEFHSKTPKVIVKGQEQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLHITSARLFSQYQGTKILAFDHQQILPSGPVLNCGWGGGPAKSETDYVAFKFDSRNGCNGESLSNQGQRQRQFPFLHGYSASASASELNQNPNFTSENGGISQKAFSNCARSLLSSSSPLETRDVGFRHMNMRPNAVPPPLHFDAYNTNIDRTNLDCEAMFHIGSDASSSNGAHQRLFSWE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2754 291 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 12 268 IPR044817 GO:0003677
Bisa08g2754 291 MobiDBLite consensus disorder prediction 1 22 - -
Bisa08g2754 291 SUPERFAMILY SBT domain 30 111 IPR036893 GO:0003677|GO:0005634
Bisa08g2754 291 ProSiteProfiles Zinc finger SBP-type profile. 29 106 IPR004333 GO:0003677
Bisa08g2754 291 Pfam SBP domain 32 105 IPR004333 GO:0003677
Bisa08g2754 291 Gene3D - 24 93 IPR036893 GO:0003677|GO:0005634
Bisa08g2754 291 FunFam Squamosa promoter-binding-like protein 14 23 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2754 Bisa-ChrBisa08 63125198 63126812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2754 28 196 SBP-box Gene Family AT5G50670 49.730 2.69e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa08g2754 SBP 8.3e-31 No_clan