Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2748 ATGATTTTACCAGGATACCCCTGCCATGGCCAAAAGCTGAAGAGGTCGTTCACAGATATTTTGATGATTTACGATCCAAAACTTCATTTTAGCTGCTTCTGCTCCTTTCAGTTACGCGAAGTTTCCTTTCTCGAAATTTTAGTTGATCCAGTAGAAATTTCAGTTTTTCTTGATTTGGATTTTGTTTGTACTGAATCAAATTATTTTTCCGCTATTCAGTTGCTGTTTCGTGCTGCGAAGCAAATCTCGAGCACCCTCCCCTGTTCAGTGCAAATTGATTCTGAGCTTCGTCAGTTCAGTCGAGTAGAAGTGAAATGCTCTCCCTGCAACTTGACCACTGCTGGTTTTTGTGAGATTGAAACACCATGCAAACTGGTTACAATATTAATGATCTGTGGATCCTTGTTTCTATTTAACAAAAGAGTTCTGCGCTTTTTCCGTAGAGATGGTCATAATTGGCGGAAGAAAAGAGACGGAAGAACTGTAGGAGAAGCTCATGAACGACTTAAGGTTGGAAATGTTGAAGCATTAAACTGTTACTATGCACATGGAGAGCAGAACCCCACTTTTCAGAGACGAAGCTATTGGATGTTGGATCCGGCATATGAGCATATTGTTCTGGTACATTACAGAGAAACAAGTGAGGGAAGGTCCAAATCTGGACCTGTCACGCAACTTTCATCAGGACCCTCACCTACATTTAGTCAGAGTCCTAGCTCATATACTGCCCAGAAGCTAGGGTCAACATCCATGTTGGGTGATTCATATGAACCTTATCAAAGTTTCTCCAGTCCTGGATCTGTAGAAGTTACGTCTCATATAGGCATTGAGAATAATGGAAAATATCACTTGGATGGAACAGATGCAGAATCAGGAAATTCAACTGAACTTGAGGTTACCCAAGCTTTACGCCGACTGGAGGAGCAGTTAAGTTTAAATGACGACTGCTTCAAAGAAATTGATTCCTTCTGCACTGAGCAGGAGAATACTCATGATTCAAACCCTCAGCATAATGAAATGGCAATTCACAAGCAAGATGTCACTGCAGCTTGCCCTGCACTTAGTGACCATGGCCAATCATATGATGGATATAGTGGCAGACAAGATGACAGTGGTGAATATTATCATGATTTACTGGACCATAATTGCTCTGATGGAAATGAAAAGGCTTTATCTTGGAACGAGATGCTAGAATCATGTAAGCCTTCATCCTCATCCATGGCCAATTTACCGGAGAAGCATGTATACAAGCCAACTGGAAATGAAAAACCACTTTCGTCTTCGGGAAGGTTACCAATTGTCAACCAGGAAAACAGTCACTGGCTAAATGTTGGCAGTAACAATGCTGTCTTCTCACTGACTCAAGACATCTGTGGAGTCAAATTTCCTCCATATTCTTCTATGGTACAAACTCAAGAAACTAATTCAGACTATTATGCAACATTGTTTGACCAAAACCAAATTGGATCAGCCCTTGATGTAGATTCAAGTTTAACTGTTGCACAAAAACAGAAATTCACAATTAGGGATGTATCCCCAGAATGGGGTTATGCTACTGAAGCTACAAAGGTCATCATTGTTGGATCTTTCCTCTGTGATCCCCTGGGTTCTGCCTGGGCTTGTATGTTCGGTGATGTTGAAGTTCCCATTGAAATAATTCAAGATGGCGTAATCCATTGTGAAGCTCCATCTCTCCTTCCTGGAAAGGTCACTCTATGCATTACTTCTGGCAATAGGGAGTCCTGCAGTGAGATCCGAGAGTTTGAATATCGCAATAAGACTAGCATTTGCACTCACTGCAATTCATTGGAATCAGAAGCCACTAGAAGTCGTGATGAGCTGTTATTACTTGTTAGATTAGCACAGATGATCCTTTCAGATTCTTCTATAAAGAGTGACTTCATAGAATCTGGAAATCATGAACTGAGAAGACAAAAACTTGATGATGATTCATGGAGCCATGTTATAGAGGCTCTTTTGGTTGGCAGTGGGACTTCATCTGGTACTGTTAATTGGCTTGTTGAAGAGCTTCTAAAGGATAAGCTTCAGTCTTGGCTTTCTTCCAGATCCCAAGAAAGAGATGAAGAGACAGGTTGTCCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAACCCTATTCTCAGTTGTGGTGTGAACATAAATTTCCGTGACATCAATGGATTGACTGCCCTGCATTGGGCCGCACGTTTTGGGAGGGAAGAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCTGCTGGAGCTGTGACAGATCCGACTGCACAAGATCCAATTGGTAAAACGGCTGCATCTATTGCAGCGGATCGTGGGCAAAAGGGTCTGGCAGGTTATCTTTCGGAGGTATCTCTTACAAGCCATTTGTCATCCCTCACTCTGGAAGAAAGTGAGCTATCTAAAGGTTCTGCTGAGCTTGAAGCTGAGTTAACTGTAAGTAGTGTCTCCAATGAAAATCTAGCTGCCAGTGAAGATCAGATTTCACTCAAAGATACCTTAGCTGCTGTCCGAAATGCAGCTCAGGCAGCTGCACGGATACAATCTGCTTTTCGTGCACATTCCTTTAGGAAACGGAGAGAGAGAGAAGCTGCTACTTCTGCAGCAGGTTTAGATGGATATGGTATCAGCGATAATATTCCAGAGCTTTCTGCCATGTCAAAATTTGCCTTTCGTAACTCACGTGAATACAATTCAGCTGCCTTGTCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCTTAGCATTGCGCCAAAAAGTAGTAAAGATACAGGCTCATGTAAGGGGTTACCAGGTTAGAAAGCATTACAAGATAATATGTTGGGCCGTTGGATTCTTTGACAAGGCTGTGTTACGCTGGCGGAGGAAAGGAGTTGGTTTACGAGGTTTTCGACAGGAGAACACAGTTGATGAAAGTGAAGATGAAGACATTCTCAAAGTGTTCCGACAACAGAAAGTGCATGAAGCAGTTGAACAGGCTGTTTCACGGGTGATGTCCATGGTCGATTCTCCAAATGCTCGTCAACAATATCATCGCATGCTTGAGAAGTATCGTCAAGCTAAGGCTGAACTTGGCAGCACCAGTCAAGGAGTATCACTATCGAGTCTGCTAGGGGAGGCTTCCAATATGGAAGATGACTATCCGTATCAGTTTCCCTAG 3216 0.4257 MILPGYPCHGQKLKRSFTDILMIYDPKLHFSCFCSFQLREVSFLEILVDPVEISVFLDLDFVCTESNYFSAIQLLFRAAKQISSTLPCSVQIDSELRQFSRVEVKCSPCNLTTAGFCEIETPCKLVTILMICGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSEGRSKSGPVTQLSSGPSPTFSQSPSSYTAQKLGSTSMLGDSYEPYQSFSSPGSVEVTSHIGIENNGKYHLDGTDAESGNSTELEVTQALRRLEEQLSLNDDCFKEIDSFCTEQENTHDSNPQHNEMAIHKQDVTAACPALSDHGQSYDGYSGRQDDSGEYYHDLLDHNCSDGNEKALSWNEMLESCKPSSSSMANLPEKHVYKPTGNEKPLSSSGRLPIVNQENSHWLNVGSNNAVFSLTQDICGVKFPPYSSMVQTQETNSDYYATLFDQNQIGSALDVDSSLTVAQKQKFTIRDVSPEWGYATEATKVIIVGSFLCDPLGSAWACMFGDVEVPIEIIQDGVIHCEAPSLLPGKVTLCITSGNRESCSEIREFEYRNKTSICTHCNSLESEATRSRDELLLLVRLAQMILSDSSIKSDFIESGNHELRRQKLDDDSWSHVIEALLVGSGTSSGTVNWLVEELLKDKLQSWLSSRSQERDEETGCPLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGLTALHWAARFGREEMVASLIASGASAGAVTDPTAQDPIGKTAASIAADRGQKGLAGYLSEVSLTSHLSSLTLEESELSKGSAELEAELTVSSVSNENLAASEDQISLKDTLAAVRNAAQAAARIQSAFRAHSFRKRREREAATSAAGLDGYGISDNIPELSAMSKFAFRNSREYNSAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKHYKIICWAVGFFDKAVLRWRRKGVGLRGFRQENTVDESEDEDILKVFRQQKVHEAVEQAVSRVMSMVDSPNARQQYHRMLEKYRQAKAELGSTSQGVSLSSLLGEASNMEDDYPYQFP 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2748 1071 Pfam IPT/TIG domain 507 590 IPR002909 -
Bisa08g2748 1071 MobiDBLite consensus disorder prediction 216 246 - -
Bisa08g2748 1071 Pfam Ankyrin repeats (3 copies) 719 797 IPR002110 GO:0005515
Bisa08g2748 1071 SMART ANK_2a 737 766 IPR002110 GO:0005515
Bisa08g2748 1071 FunFam Calmodulin-binding transcription activator 2 911 959 - -
Bisa08g2748 1071 ProSiteProfiles Ankyrin repeat profile. 737 769 IPR002110 GO:0005515
Bisa08g2748 1071 SUPERFAMILY E set domains 507 591 IPR014756 -
Bisa08g2748 1071 Gene3D - 911 959 - -
Bisa08g2748 1071 ProSiteProfiles IQ motif profile. 912 941 IPR000048 GO:0005515
Bisa08g2748 1071 SMART CG_1_2 119 214 IPR005559 GO:0003677
Bisa08g2748 1071 Gene3D - 642 802 IPR036770 -
Bisa08g2748 1071 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 133 1042 - -
Bisa08g2748 1071 FunFam Calmodulin-binding transcription activator 4 isoform A 617 802 - -
Bisa08g2748 1071 Pfam CG-1 domain 133 212 IPR005559 GO:0003677
Bisa08g2748 1071 ProSiteProfiles CG-1 DNA-binding domain profile. 87 219 IPR005559 GO:0003677
Bisa08g2748 1071 Gene3D Immunoglobulins 501 595 IPR013783 -
Bisa08g2748 1071 FunFam Calmodulin-binding transcription activator 2 501 594 - -
Bisa08g2748 1071 MobiDBLite consensus disorder prediction 217 246 - -
Bisa08g2748 1071 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Bisa08g2748 1071 SMART iq_5 934 956 IPR000048 GO:0005515
Bisa08g2748 1071 SMART iq_5 911 933 IPR000048 GO:0005515
Bisa08g2748 1071 SMART iq_5 854 876 IPR000048 GO:0005515
Bisa08g2748 1071 Pfam IQ calmodulin-binding motif 937 956 IPR000048 GO:0005515
Bisa08g2748 1071 Pfam IQ calmodulin-binding motif 914 932 IPR000048 GO:0005515
Bisa08g2748 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 962 IPR027417 -
Bisa08g2748 1071 ProSiteProfiles Ankyrin repeat region circular profile. 737 763 - -
Bisa08g2748 1071 ProSiteProfiles IQ motif profile. 935 959 IPR000048 GO:0005515
Bisa08g2748 1071 SUPERFAMILY Ankyrin repeat 708 798 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2748 Bisa-ChrBisa08 63021597 63030478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2748 133 1071 CAMTA Transcription Factor Family AT1G67310 52.069 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bisa08g2748 Ank_2 2.1e-06 CL0465