Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2745 ATGGCTTCGGCCGGCGGCTGGACGAAACTGTGGAAGCCACTCGGAAGATTCCAGGCTTTCACTCGCTCTGGTATTTATAAACTTGACAGCCGATCTGGAAGGCCAGCTGTAAGGAACTTAAACAGTGCTCAGATTCCAGTGGAGAAAAAAAAAGGAAAAGATAATAGCACCTTGAGAGGTTACAATCATGCGTGCTTGAGCTCTTTACCTACTCTTTTGACTCTTGGTCCTCCCATGGCAATATTGGAAAAGTACGGGGTATCTAATGCCATTCGGCAGAGAAGTGGATGTTTATTCTTGTCCCGTCTTTGTTTTCCCTCTGAAACCCACTTGTTTTTTCCGGGATTTGAGGTGGTTGGCGTTGTTCTTACTCATTTTCCTTCGATTTCCACCTCTCACCAGTTCAGAATTCTGCTTATAGGTTTTCACTGGGGAGATTCTGTGGATTTGACAGTGGTTCTCTCACTAGCCTACCTGGAATTAGCTAGGAGTCATAATACCCACTACCTCCTGGAACTGTTTCTAGTTAACTTGTGTTGGTTACTGTTGTGGATGAGTTTGCTCTATGTAGTTGGGTTTGGTCTAAAAGTGGGGCATGTACTTTTGGTGCTATGTTGCTGGATTGTGTCTGTTTTTTACATGAACCGGTCTAACAACGGTGGAATTATGGACACGAAGGTTGATTTTCTTGGCGGTGGTGGTGGGAAGATGTGGCTCAAATGGTGGGAGAAGATCTCCGGGAATAGTTGTAAAATCCACCAACACTACAACCAGTATATTGGGTCCAAGAGAGTCAGGACAGCTCTGTGGAGAAGGCTTTTGCTGACATGGGTACTGGGTTGGACCATGGTATCTTTGTGGATCTTCTGCTACATGACCTTTCAAGCTACTGAGAAGAGGAAAGAGACTCTGGCTAGTATGTGTGACGAGAGGGCTAGGATGCTTCAGGATCAGTTTAATGTTAGCATGAACCATATCCAATCCATGTCAATTCTCATCGCAACCTTCCACCATGCCAAGTCCCCTTCTGCCATCGATCAGGCAACATTTGCTAGGTACACAGAGCGAACTGCCTTTGAAAGGCCTCTTACAAGTGGTGTTGCGTATGCTGTGAGAGTGCTTCATTCTGAAAGGGAACAATTTGAGAAACAACAAGGGTGGACCATTAAGAGGATGGATACCGTTGAGCAGAACCCCGTTCATAAGGATGATTATGCTCCTGAGGCATTGGAGCCTTCCCCCGTTCAAGAAGAATATGCTCCTGTCATTTTTGCACAGGATACAATTTCCCATGTCATCTCTGTCGATGTGCTTTCTGGAAAGGAAGATCGTGAAAATGTGTTGCGTGCAAGAGAATCAGGGAAAGGCGTTTTAACTGCTCCTTTCAGGCTTCTTAAAACAAATCGTCTAGGAGTTATCCTGACATTTGCTGTCTATAAGACAGAAGTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCAACAGATGGGTATCTTGGTGGTGTCTTTGATGTTGAGTCATTGGTGGAAAAGTTACTTCAACAACTTGCTAGCAAGCAAACTGTAATTGTTAATGTGTATGATACCACTAATCATACTCACCCAGTTTCCATGTATGGTTCAAATGTATCAGATGATGGGTTCCATCATGTTAGCCCCCTGAACTTTGGAGATCCTTTCAGGAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCTCCATGGCCATGGTTGGCAATAACTACTTCAATTGGAATCCTTGTTATTGCACTCCTTGTGGGTTATATTTTCCATGCTACTGTGAATAGAATTGCGAAAGTAGAGGATGATTACCGTGAGATGATGGAACTTAAAAAACGAGCTGAGGCAGCTGATGTTGCAAAATCCCAGTTCCTGGCTACTGTTTCCCATGAGATCAGAACACCAATGAATGGTGTTCTAGGAATGTTGCATATGCTTATGGACACCGATCTTGATGTAACACAGCAGGAATATGTCAGAACAGCGCAGGGTAGTGGAAAAGCTCTAGTGTCACTTATAAATGAGGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGTTAGAGCTTGAGGCAGTCCTGTTTGACTTACGAGCAATTTTGGATGATGTATTATCACTATTCTCTGAGAAATCTCAAGAAAAAGGAGTAGAGTTGGCTGTTTATATCTCAGATCAGGTTCCTGAGCTGCTAGTAGGTGATCCTGGAAGGTTTCGGCAAATAATTACAAATCTGATGGGTAACTCAATTAAGTTCACAGACAAGGGACACATCTTTGTCACTGTTCATCTTATTGAGGAGGTTGTCAATTCAATTGAGGTTACAACATCAAAGAATACTTTGAGTGGCTTTCCAGTTGCTGACAGATGCCAAAGTTGGAAAGGCTTCAGTAGTATTAATCAAGAGGGACTTCTTGGTTCTGTCTCATCTTCCTCCTCTGATCACATTACTCTTATTGTATCTGTTGAGGATACGGGTGAAGGTATTCCTCTAGAAGCCCAATCCCGCATCTTCACTCCATTCATGCAGGTTGGTCCATCCATCTCCCGGAAACATGGGGGAACAGGTATTGGGCTAAGCATTAGCAAGTGTTTGGTTGGCCTTATGCATGGGGAAATTGGATTTGTGAGCACACCCAAGATTGGGTCGACATTTACATTTACAGCTGTCTTCATGAATGGATCCCCCAGTTCAAATGAGCCTAGAAGTCAACAAATCAGCAACCAACCTAACCTTGCATCCTCAGAATTTCAGGGCATGACTGCACTACTTATAGACTCTAGACCTGTTCGAGCTAAAGTGTCAAGATATCACATTCAACGGCTTGGCATACACGTTGAAATAGCTTCAGATCTAAATCAAGGTTTGTCTGCCATAAGCAATGTGAATATAGTTATTAATATGATCTTGGTTGAGCAGGAGGTCTGGGATAGGGATTCTGGCATCTCGTCTCAATTTATCGGTAACATAAGAAAAATTGATCATGGTGTCCCTACAAAGCTATTCATTCTTGTTAATTCTAGTAGTTCTTCTAGAACAAGTTCTGTTACACTGGGCGTTCATAATCCGACTGTCATCACAAAACCTCTAAGAGCAAGCATGCTTGCTGCTTCACTACAGCGAGCCATGGGTATTGGGAACAAGGGGAATGCTCGAAATGGGGAGCTCCCAAGTTTGTCTCTCCGCCATCTTCTGCTTGGGAAAAAGATTCTCATTGTAGATGACAATGGTGTGAACCGGAAAGTAGCAGCTGGTGCTTTAAGAAAATATGGAGCTGATGTGGTTTGTGTTAACAGTGGAAAAGAAGCCATCTCTTCTCTGAGGCCACCCCATCAGTTTGATGCCTGTTTCATGGATATTCAAATGCCAGAAATGGATGGTTTTGAAGCTACTAAGAGGATTAGGGAGATGGAAGAACTTGTGAACAAACAAGTGGCCGTAGAAGCCTCGGAGAATATTTCAAACTGGCATGTACCCATTTTGGCTATGACTGCAGATGTGATCCAGGCAACACACGAGGGATGCTTGAGGAGTGGAATGGATGGATATGTCTCAAAACCTTTTGAAGCTGAACAGCTTTATCGGGAAGTTTCACGGTTTTTCCCATCATCTTGCATCACTGTCTGTTCCCCAGGACACTTCAAGTGCATAAATAGGTTCACAAATCTCCTGAGAGGAGTGTACATAGGAGCCAAGTTTGATTGA 3726 0.4351 MASAGGWTKLWKPLGRFQAFTRSGIYKLDSRSGRPAVRNLNSAQIPVEKKKGKDNSTLRGYNHACLSSLPTLLTLGPPMAILEKYGVSNAIRQRSGCLFLSRLCFPSETHLFFPGFEVVGVVLTHFPSISTSHQFRILLIGFHWGDSVDLTVVLSLAYLELARSHNTHYLLELFLVNLCWLLLWMSLLYVVGFGLKVGHVLLVLCCWIVSVFYMNRSNNGGIMDTKVDFLGGGGGKMWLKWWEKISGNSCKIHQHYNQYIGSKRVRTALWRRLLLTWVLGWTMVSLWIFCYMTFQATEKRKETLASMCDERARMLQDQFNVSMNHIQSMSILIATFHHAKSPSAIDQATFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTVEQNPVHKDDYAPEALEPSPVQEEYAPVIFAQDTISHVISVDVLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKTEVPSNATPNERIQATDGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDTTNHTHPVSMYGSNVSDDGFHHVSPLNFGDPFRKHEMHCRFKQKPPWPWLAITTSIGILVIALLVGYIFHATVNRIAKVEDDYREMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDLRAILDDVLSLFSEKSQEKGVELAVYISDQVPELLVGDPGRFRQIITNLMGNSIKFTDKGHIFVTVHLIEEVVNSIEVTTSKNTLSGFPVADRCQSWKGFSSINQEGLLGSVSSSSSDHITLIVSVEDTGEGIPLEAQSRIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMHGEIGFVSTPKIGSTFTFTAVFMNGSPSSNEPRSQQISNQPNLASSEFQGMTALLIDSRPVRAKVSRYHIQRLGIHVEIASDLNQGLSAISNVNIVINMILVEQEVWDRDSGISSQFIGNIRKIDHGVPTKLFILVNSSSSSRTSSVTLGVHNPTVITKPLRASMLAASLQRAMGIGNKGNARNGELPSLSLRHLLLGKKILIVDDNGVNRKVAAGALRKYGADVVCVNSGKEAISSLRPPHQFDACFMDIQMPEMDGFEATKRIREMEELVNKQVAVEASENISNWHVPILAMTADVIQATHEGCLRSGMDGYVSKPFEAEQLYREVSRFFPSSCITVCSPGHFKCINRFTNLLRGVYIGAKFD 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2745 1241 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 682 895 IPR036890 -
Bisa08g2745 1241 Pfam Response regulator receiver domain 1077 1203 IPR001789 GO:0000160
Bisa08g2745 1241 PANTHER TWO-COMPONENT HISTIDINE KINASE 276 1201 - -
Bisa08g2745 1241 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 613 694 IPR036097 GO:0000155|GO:0007165
Bisa08g2745 1241 CDD HisKA 628 689 IPR003661 GO:0000155|GO:0007165
Bisa08g2745 1241 Pfam CHASE domain 344 540 IPR006189 -
Bisa08g2745 1241 Pfam His Kinase A (phospho-acceptor) domain 628 693 IPR003661 GO:0000155|GO:0007165
Bisa08g2745 1241 CDD PRTases_typeI 1029 1104 IPR000836 -
Bisa08g2745 1241 CDD HATPase_EvgS-ArcB-TorS-like 745 898 - -
Bisa08g2745 1241 Gene3D - 292 344 - -
Bisa08g2745 1241 SMART CHASE_2 341 542 IPR006189 -
Bisa08g2745 1241 SUPERFAMILY CheY-like 1074 1207 IPR011006 -
Bisa08g2745 1241 ProSiteProfiles Histidine kinase domain profile. 635 900 IPR005467 -
Bisa08g2745 1241 SMART HisKA_10 628 693 IPR003661 GO:0000155|GO:0007165
Bisa08g2745 1241 SUPERFAMILY CheY-like 923 1051 IPR011006 -
Bisa08g2745 1241 Gene3D - 597 691 - -
Bisa08g2745 1241 CDD REC_hyHK_CKI1_RcsC-like 1077 1204 - -
Bisa08g2745 1241 Gene3D CHASE domain 345 574 IPR042240 -
Bisa08g2745 1241 FunFam Histidine kinase 4 345 574 - -
Bisa08g2745 1241 ProSiteProfiles CHASE domain profile. 341 567 IPR006189 -
Bisa08g2745 1241 Coils Coil 605 625 - -
Bisa08g2745 1241 ProSiteProfiles Response regulatory domain profile. 1076 1208 IPR001789 GO:0000160
Bisa08g2745 1241 SMART HKATPase_4 740 900 IPR003594 -
Bisa08g2745 1241 FunFam Histidine kinase 4 600 691 - -
Bisa08g2745 1241 PRINTS Bacterial sensor protein C-terminal signature 843 853 IPR004358 GO:0016310|GO:0016772
Bisa08g2745 1241 PRINTS Bacterial sensor protein C-terminal signature 860 878 IPR004358 GO:0016310|GO:0016772
Bisa08g2745 1241 PRINTS Bacterial sensor protein C-terminal signature 825 839 IPR004358 GO:0016310|GO:0016772
Bisa08g2745 1241 PRINTS Bacterial sensor protein C-terminal signature 884 897 IPR004358 GO:0016310|GO:0016772
Bisa08g2745 1241 ProSiteProfiles Response regulatory domain profile. 928 1050 IPR001789 GO:0000160
Bisa08g2745 1241 Gene3D - 1071 1212 - -
Bisa08g2745 1241 SMART REC_2 1075 1204 IPR001789 GO:0000160
Bisa08g2745 1241 Gene3D - 692 900 IPR036890 -
Bisa08g2745 1241 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 740 897 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2745 Bisa-ChrBisa08 63004616 63011476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2745 185 1214 Miscellaneous Gene Families AT1G27320 67.840 0.0 1409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa08g2745 CHASE 2.1e-37 CL0165