Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2714 ATGATGGATGCTGCTGAGGTTGAAGAAAATCTGTTTGCAGCAAGCGATGCCAAGTTACATGGAGAAATGTGCAAGGCTCTTTCTTCAATGTATTGCAAAATTTTGACAATTTTTCCATCTTTAGAAGCAGCGAGGCCTAGGAGCAAATCTGGTATTCAGGCATTATGTTCATTGCATGTAGCCCTAGAGAAGGCCAAAAATGTTCTTCAGCACTGCTCAGAGTGTAGTAAACTTTACTTGGCTATAACTGCGGATGCTGTTCTTTTAAAATTTGAGAAGGCTAAAGTTGCTCTTAAAGATAGTCTTAAGCAGGTGGATGATATTGTTCCGCGATCTATTGGGTGTCAGATTCAGAAGATTGTGAGTGAACTCGACAGTATAACATTTGCACTTGACCCATCGGAGAAACAAGTTGGTGATGATTTAATTGCATTGCTTCAGCAGGGGAGAAAATTTAGCGACTCTAATGATGGTAGTGAGCTTAAATGTTTTCACCAGGGTGCTATTAGACTTGGAATCACATCTTCAAGAGCAGCTCTTACTGAACGAAGAGCTCTCAAGAAGCTCTTAGAAAGAGCCAAGGCTGAGGAAGACCAGCGAAAAGAATCAATTGTTGCATATCTTTTACACCTTATGAGGAAATATTCCAAGATATTTAAAAGTGAACCGACAGATGATAATGATTCACAAGGTTCAGCTCCGTGTTCTCCCTCTGTTCAGGGATCTGTTGAGTATGGTGGTCCTGGAGGTCAATGTCTCCTTGACAGAGAGACTTCAAAGCGTTGTTCCTTTAGTTTTAATACATGTAATAGGAAATCAGGGCAGATGCCCCTTCCACCCGAAGAGTTGAGGTGTCCAATATCTCTGCAGCTTATGTATGATCCTGTCATCATTGCTTCTGGGCAAACATATGAAAGGGTTTGCATTGAGAAATGGTTCAGTGATGGGCACACCACCTGCCCCAAGACTCAACAGAAACTTCCGCATCTTTCCTTGACTCCTAATTACTGTGTTAAGGGTCTTGTTGCTAGTTGGTGTGAACAGAGTGGAGTTCTTGCTCCTGATGGCCCTCCTGGATCTCTTGATCTTAGCTACTGGAGATTGGCATTATCAGAGCCTGAGTCAACAAATTCAAGATCTGTAAAAAGTTTTAGCTCTTGCAAGTTGAAGGGTGTCAAAGTGGTTCCTTTAGAAGCAAGCAGTATACCAGAGGAAGCTAGGCTAGATAAAACTAAAAGTGTGTCTCCACAGGAGGAAGATACCGAGCAGTATCTAAGGTTTCTACAAGTTCTGACCGAAGAGAACGATTGGAATACAAAATGTAAAGTGGTAGAACAGTTAAGGATGTTACTGAGGGATGATGAGGAAGCCAGGGTTTATATTGGGGCGAATGGGTTTATTGAGGCACTTTTGCAGTTTCTGCGGTCAGCTGTCTGTGAAGGCAACCTAACAGCTCAAGAAAGTGGAGCAATGGCTCTCTTCAACCTTGCTGTGAATAACAGCAGAAATAAGGCAATTATGTTATCAGCAGGAGTACTATCGCTGTTGGAGGAAATGATTTCTAATCCCAGTTCTCATGGCTATGCAACGGCCCTCTACCTGAATATCTCTTGCCTTGAAGAAGCCAAGACCATGATTGGGATGAGTCAGGCTGTCCAGTTCCTTATCCATCGCCTTCAACCTGACACTGATGTTCAATGCAAGCAAGATTCCGTCCATGCACTATATAATCTCTCCACTGTCCCCTCCAATATCCCAAACCTCCTTTCATCTGGCATCATTCGTAGCCTCCTATCCCTTCTTGCAGGCAAGGGAAATTCAATGTGGGCAGAAAAATGCATCGCTGTTTTGACAAATTTGGCTGCTTCTCATCTGGGAAAGCAGGAAATCATCTCAACTCCTGGACTTATCAGTGCTTTAACCAGAAGACTGGACTCTGATGAACTCCTAGAGCAGGAGCAAGCTGCGGCTTGTCTCGTAATTTTGTGTAACGGGAATGAGAAATGTAGCTACATGGTCCTGCGAGAAGGTGTAATACCTGTATTGGTGTCAATGTCAGTGAATGGTACCCCAAGAGGAAAAGAGAAGGCTCAGAAACTTTTGATGCTCTTTCGTGAGCAGCGACAACGAGACCCTTCACCATCTAAGACACGCTTGGGCTCTCCTGAAATTAACAATAATAAAACTAATGATCATTTGGCTTTGGCTAAGCCTCCTCCAGAAACGAAACCACTGTTTAAGTCATTGTCTAGAAGAATAATTGAGAAGCCTTTTAAGTTTTTCTGGAAAAGCAAGAGCTATTCTCTTTTCCATATATAA 2319 0.4278 MMDAAEVEENLFAASDAKLHGEMCKALSSMYCKILTIFPSLEAARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITADAVLLKFEKAKVALKDSLKQVDDIVPRSIGCQIQKIVSELDSITFALDPSEKQVGDDLIALLQQGRKFSDSNDGSELKCFHQGAIRLGITSSRAALTERRALKKLLERAKAEEDQRKESIVAYLLHLMRKYSKIFKSEPTDDNDSQGSAPCSPSVQGSVEYGGPGGQCLLDRETSKRCSFSFNTCNRKSGQMPLPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHTTCPKTQQKLPHLSLTPNYCVKGLVASWCEQSGVLAPDGPPGSLDLSYWRLALSEPESTNSRSVKSFSSCKLKGVKVVPLEASSIPEEARLDKTKSVSPQEEDTEQYLRFLQVLTEENDWNTKCKVVEQLRMLLRDDEEARVYIGANGFIEALLQFLRSAVCEGNLTAQESGAMALFNLAVNNSRNKAIMLSAGVLSLLEEMISNPSSHGYATALYLNISCLEEAKTMIGMSQAVQFLIHRLQPDTDVQCKQDSVHALYNLSTVPSNIPNLLSSGIIRSLLSLLAGKGNSMWAEKCIAVLTNLAASHLGKQEIISTPGLISALTRRLDSDELLEQEQAAACLVILCNGNEKCSYMVLREGVIPVLVSMSVNGTPRGKEKAQKLLMLFREQRQRDPSPSKTRLGSPEINNNKTNDHLALAKPPPETKPLFKSLSRRIIEKPFKFFWKSKSYSLFHI 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2714 772 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 465 511 IPR000225 GO:0005515
Bisa08g2714 772 Gene3D - 533 708 IPR011989 -
Bisa08g2714 772 Pfam U-box domain 280 348 IPR003613 GO:0004842|GO:0016567
Bisa08g2714 772 ProSiteProfiles U-box domain profile. 278 352 IPR003613 GO:0004842|GO:0016567
Bisa08g2714 772 FunFam RING-type E3 ubiquitin transferase 278 352 - -
Bisa08g2714 772 CDD RING-Ubox_PUB 280 332 IPR045210 -
Bisa08g2714 772 PANTHER U BOX DOMAIN-CONTAINING 24 709 - -
Bisa08g2714 772 SUPERFAMILY RING/U-box 276 353 - -
Bisa08g2714 772 MobiDBLite consensus disorder prediction 706 742 - -
Bisa08g2714 772 Coils Coil 176 199 - -
Bisa08g2714 772 SMART Ubox_2 282 345 IPR003613 GO:0004842|GO:0016567
Bisa08g2714 772 Gene3D - 420 532 IPR011989 -
Bisa08g2714 772 SMART arm_5 499 538 IPR000225 GO:0005515
Bisa08g2714 772 SMART arm_5 581 622 IPR000225 GO:0005515
Bisa08g2714 772 SMART arm_5 454 498 IPR000225 GO:0005515
Bisa08g2714 772 SMART arm_5 539 580 IPR000225 GO:0005515
Bisa08g2714 772 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 351 IPR013083 -
Bisa08g2714 772 MobiDBLite consensus disorder prediction 714 732 - -
Bisa08g2714 772 SUPERFAMILY ARM repeat 426 705 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2714 Bisa-ChrBisa08 62496329 62500102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2714 2 771 U-box Gene Family AT1G24330 64.066 0.0 988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2714 08 62496329 62500102 Bisa08g2714 08 62496329 62500102 ECH