Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2713 ATGACGGTGTTCGTGAACTCAGGCTCAGGGCTTAGAAAGCAGGTCTTTCCTATTGACTACGAAACAGAGGTGTCACAGCGTCTCGTCGACGCTGCTCATCACAGCGACTCCGATGCTGCTTTTGAATGTATCGCTAATCCTTTTGTCGACGTCAATTTCATCGGAACGGTGAACTTAAAGTCTAAAACGACGGAGATCGTGTTGCACGACAAGTCGCCTCACGAAGTGCGCTTCGGATACGAGGAGTTCAAGACCGAGGTCACTGCTCTGTTTCTCGCTGCTCATTCTGGGAATTTGACTCTCCTCAGAAAGCTGCTGAATGCTGGAGTTGATGTGAATTTGAGAGTGTTCCGGGGCTATGCCACAACGGCAGCGGTGAGGGAAGGCCATCTACAAGTATTGGAGACACTTATCAATTCTGGAGCGTCTCAGCTCGCGTGCGAGGAGGCTTTGATGGAAGCAAGCCAGTTGGGGCAGGCTAGATTTGCTGAGCTACTCATGCAGTCAAACATGATACGTCCTCAAGTTGCTGTTCATGTCCTCGTCTCTGCCTGTTGTCGAGGATTTGCCGAGGTTGTGGATGTACTCATCAAGCATGGAGTGGATATCAATGCGATTGATAGGTCGTTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGTAATGCATTGTTTGCTGCTGTCGTAAGCAGGCAGATAAATGTTGTTAAATTGCTCTTGCAGGTTGGTGTAAGGACAGACATTGAGGTCAAACTTGGGGCTTGGACATGGGAAACTGATACAGGAGAAGAATTTCGTGTGGGTGTGGGATTAGCCGATGCTTATCCTATCACTTGGTGTGCTGTGGAGTATTTTGAAGCTAGTGGAGCTATATTGCATATGCTGCTATGCCACCTCTCGCCCAGCACTTTACACTTAGGAAGGACTCTTCTGCACCATGCTATCCTTTGCAACAATGAAAAAGCTGTAAATGCACTCTTAAATAGCAGTGCAGATGCAGAAGTGGAAGTTCTAACGACTGAGGAAACCAATTTACGTCCTATTCACATGGTTGCACGGTTTGGATCATGCAACATTCTTCGTTGCCTAATTAATGGTAATTGCAATTTAGACTCTCAAACAAAATCTGGAGATACAGCACTAATGATCTGTACAAGGAATAAGCACGAGGATTGCCTTAGAGTCCTGGCATCAGCAGGTGCTGATTTGGGGCTGGTAAATTCATTTGGTCACTGTGCAACCTCAATTGCAAAGTCAGTTCAGTGGACTAATATCTTCCAGAAAGCAATTTTGGATGTAATTCGAGCTGGAAAGGTTGTTAAATCCAGCAATGCCTCCAGATTTTCCGCCTTAATTTTCGTAACTCGTGCTAATGAAATTGAGGCTTTGAAAGAACTCATCGAACACGGAAACATAGATCTAGATGAGCAAGATGAAAATGGATTCTCAGCTGCCATGACAGCTGTAGCAGAAGGTAACGCAGAGGCTTTCACGTTGCTTCTTAAAGCTGGAGCTGATGTTCTAAAGCTGAAAAATACGTACGGTTTGACGGCCCTTAACCTTATAGACGTAAATAAATATGGTAAGGCTTTTGAAAAAGTGATGCTTGAATATGCTCTTGAAAAGGGATGCAATGTCTCCAACATTCAACTACATCCTCTACACCATGCTGCTCGCCACGGGGACGCAGATCTTATTCATAAATTAATGAAAAGAGGGTTTGATGTCAACTCTTTTGACGATAATGGTTATACCCCATTAATGTTAGCAGCTAGAGAAAGCCATGGTGAAATGTGTGAGCTTCTGATCTCATGTGGTGCCAAGTGTGATGTTCAGAATGAGAGCAATGAAACGGCCCTTTCACTTGCAAGAGAAAACCAAAATGGTGTAAGAAATGATGCAGAGCGTGTGATATTGGATGAGCTAGCTCGAAGACTCGTCTTGCGTGGGGCTCGTGTGAAGAAACATACTAAGTGTGGGAAAGGGTCACCCCATAGTAAGATACTGAGAATGGTGGAAGGTGCTGGAATATTACGATGGGGAAAATCGAACAAGAGAAACGTAATTTGCAAAGATGCTGAGGTAGGTCCCAGTGAAAAATTCAGATGGAATCGCAGGAGGAAGTTTGATGTTGACCAGCCAGGAATGTTCCATGTGGTTACTACAAGAAAGAAAGAGGTTCATTTTGTATGTGAAGGTGGGGTTGAAATGGCTGAGTTCTGGGTTAGGGGGATCAAATTAGTGACTAGGTTAGGGGGATTAAATTAG 2277 0.4453 MTVFVNSGSGLRKQVFPIDYETEVSQRLVDAAHHSDSDAAFECIANPFVDVNFIGTVNLKSKTTEIVLHDKSPHEVRFGYEEFKTEVTALFLAAHSGNLTLLRKLLNAGVDVNLRVFRGYATTAAVREGHLQVLETLINSGASQLACEEALMEASQLGQARFAELLMQSNMIRPQVAVHVLVSACCRGFAEVVDVLIKHGVDINAIDRSLLQSSKPFLHANVDCNALFAAVVSRQINVVKLLLQVGVRTDIEVKLGAWTWETDTGEEFRVGVGLADAYPITWCAVEYFEASGAILHMLLCHLSPSTLHLGRTLLHHAILCNNEKAVNALLNSSADAEVEVLTTEETNLRPIHMVARFGSCNILRCLINGNCNLDSQTKSGDTALMICTRNKHEDCLRVLASAGADLGLVNSFGHCATSIAKSVQWTNIFQKAILDVIRAGKVVKSSNASRFSALIFVTRANEIEALKELIEHGNIDLDEQDENGFSAAMTAVAEGNAEAFTLLLKAGADVLKLKNTYGLTALNLIDVNKYGKAFEKVMLEYALEKGCNVSNIQLHPLHHAARHGDADLIHKLMKRGFDVNSFDDNGYTPLMLAARESHGEMCELLISCGAKCDVQNESNETALSLARENQNGVRNDAERVILDELARRLVLRGARVKKHTKCGKGSPHSKILRMVEGAGILRWGKSNKRNVICKDAEVGPSEKFRWNRRRKFDVDQPGMFHVVTTRKKEVHFVCEGGVEMAEFWVRGIKLVTRLGGLN 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2713 758 Coils Coil 463 483 - -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat region circular profile. 585 617 - -
Bisa08g2713 758 PANTHER ANKYRIN REPEAT-CONTAINING 22 745 - -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Bisa08g2713 758 Gene3D - 179 260 IPR036770 -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Bisa08g2713 758 Gene3D - 16 178 IPR036770 -
Bisa08g2713 758 SUPERFAMILY Ankyrin repeat 310 629 IPR036770 -
Bisa08g2713 758 Gene3D - 300 431 IPR036770 -
Bisa08g2713 758 Gene3D - 537 703 IPR036770 -
Bisa08g2713 758 SMART ANK_2a 346 375 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 176 205 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 483 512 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 85 114 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 117 146 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 552 581 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 585 614 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 222 253 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 379 408 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 449 479 IPR002110 GO:0005515
Bisa08g2713 758 SMART ANK_2a 309 338 IPR002110 GO:0005515
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Bisa08g2713 758 Pfam Ankyrin repeats (3 copies) 90 169 IPR002110 GO:0005515
Bisa08g2713 758 Pfam Ankyrin repeats (3 copies) 538 616 IPR002110 GO:0005515
Bisa08g2713 758 Pfam Ankyrin repeats (3 copies) 347 408 IPR002110 GO:0005515
Bisa08g2713 758 SUPERFAMILY Ankyrin repeat 83 252 IPR036770 -
Bisa08g2713 758 Gene3D - 432 536 IPR036770 -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat region circular profile. 556 584 - -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Bisa08g2713 758 ProSiteProfiles Ankyrin repeat profile. 556 584 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2713 Bisa-ChrBisa08 62486985 62490695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2713 336 521 Ion Channels AT4G32500 29.167 4.78e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2713 08 62486985 62490695 Bisa08g2713 08 62486985 62490695 ECH