Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2709 ATGGCGGCTGGGAGACATGGGGCTTATCGCGACAACGGATATAGGGAACGTGAGTCCAGTCCTGATGTTTCAAGGCGGAGTTCTAATAATTCTGAAGAAGACAATGATCAGATTAGGAATGGTAGCCGTGATACTGCGAGGGGTAGGAGTAGAGATGCAAGAGATTGGATTAGGGTTAGGCAGAAAGATGGTAGGGAGGGAGAGGTATTAAATGACAAGTATCAGTCATCTTCGAGTAGGAGCAATTCAGGAAGCAGCGGTGGCCTTGCTTCCGGACGACGTAATTTTTCCGTTAAGACTATGGATAGGGAACCGGGTGAGCTTTCTAGTGAGAGTGGGTCTGATGATGCAATGGAATCAGAACCACAGGTGAAATATTGTGAGGATACAAAGGTTGAAGAAAATGGGACTCGATCTCCACTGGTGAGGAAAAGAAAATTTTCACCGATAGTGTGGGATGAGGATGACGACAAAGAAACGAATAATTCTTCCAAAGACAAGGTTTCCACGGCAGTGAATTCTCTTCCACCCCCACCTCAACCGCCAAATACATTCTTTCAATCCCCTAGCCCTTCATTTATTAAAGATGAAACACATCCCTTGACAAATGTAGAATCTGAGAATCTTGAGTTGTCGTCTGCAGATAAGCTTCCACAGCCCTCTGATATCGTTCAGGATGCTGAATCTGAGTCTCCTGTAGGATTTTCTTCTTTCTCGCCTGAGCAGAGTTGGAGTAATAATCAGGGAGCTCAGCAACCAGAAGGTGAAGATTATGTTCCAACTCACAATATATCTTCTTCGAGATGGGCAGGCGGAGATGATTCTTCAGGTGATGAAGGTGAAATCATTGATGATGAGGAAGTGCCTAAAAGGAAGAAGAGATTGTCTCCTGAATTACTGGAGACCAGGGTAAGAAACAAGCTATTAAGTCCAGAAGATTCTAAAAGAGAAGCCTTAGAATCTGAGGAAAAAGGTAACCATGGTAGAACCTCCAGTGGGGATGATCATCCTGGTATTGGATTAACTAAGGATGACTATATGGATATTGATGGTCAAGTTAGCAAAAGTGATGCCGATGATAGACACTTAGATACTGATACTGAAGATGTTGATGATCATCGGGAGATCCCAGAGCCTCCAGCTCCACCACCAAGAGTTGTCAATATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTAAACAAGATAGATGAAGGGACATATGGTGTTGTATACCGAGCCAGAGATAAGAAGACTGGGGAAATAGTGGCATTAAAGAAGGTAAAGATGGAGAAAGAAAAAGAAGGCTTTCCTCTTACTTCCCTTAGAGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGACGTCAAGGAAGTGGTGGTAGGGAGTAGCCTTGATAGTATTTTCATGGTGATGGAATACATGGAACATGATCTCAAAGGGCTTATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTGAAGTGCCTCATGCTACAGCTTTTAGAAGGTGTAAAATACCTTCATGACAACTGGGTTCTTCATAGGGATTTGAAGACTTCAAACCTGCTTCTGAATAATAGGGGCGAGTTGAAAATTTGTGATTTTGGATTGGCTCGTCAGTATGGGAGTCCATTGAAACCGTATACACACCTTGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTTGGAGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTCTCGGTTGTATAATGGCTGAACTATTGTCCAAGGAACCACTGTTTAATGGGAAGACTGAATTTGATCAACTTGACAAAATTTTCAGGACTCTTGGTACGCCAAATGAAACAATTTGGCCTGGTTTTTTGAAACTGCCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTACAACCTCCTTCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCGGTTCTCTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTTACTTATGACCCTGAAAAGCGAATCACAGCTGAAGCTGCACTCAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCCAAGTCTAAAGAATTTATGCCCACTTTCCCTGCTCAACATGCTCAAGACAGGCGGATGCGAAGGGTATTGAAGAGTCCAGATCCTTTACAGGAGCAGCGCAGGAAGGAGTTGCAGCAAGGTGAATTAGGGACTGGTGGTATTTTTGGCTAA 2238 0.4339 MAAGRHGAYRDNGYRERESSPDVSRRSSNNSEEDNDQIRNGSRDTARGRSRDARDWIRVRQKDGREGEVLNDKYQSSSSRSNSGSSGGLASGRRNFSVKTMDREPGELSSESGSDDAMESEPQVKYCEDTKVEENGTRSPLVRKRKFSPIVWDEDDDKETNNSSKDKVSTAVNSLPPPPQPPNTFFQSPSPSFIKDETHPLTNVESENLELSSADKLPQPSDIVQDAESESPVGFSSFSPEQSWSNNQGAQQPEGEDYVPTHNISSSRWAGGDDSSGDEGEIIDDEEVPKRKKRLSPELLETRVRNKLLSPEDSKREALESEEKGNHGRTSSGDDHPGIGLTKDDYMDIDGQVSKSDADDRHLDTDTEDVDDHREIPEPPAPPPRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRTLGTPNETIWPGFLKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRVLKSPDPLQEQRRKELQQGELGTGGIFG 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2709 745 MobiDBLite consensus disorder prediction 121 164 - -
Bisa08g2709 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Bisa08g2709 745 CDD STKc_CDC2L1 393 690 IPR045267 GO:0004674|GO:0005524|GO:0006468
Bisa08g2709 745 MobiDBLite consensus disorder prediction 71 93 - -
Bisa08g2709 745 PANTHER CELL DIVISION PROTEIN KINASE 397 696 - -
Bisa08g2709 745 MobiDBLite consensus disorder prediction 338 379 - -
Bisa08g2709 745 MobiDBLite consensus disorder prediction 9 70 - -
Bisa08g2709 745 MobiDBLite consensus disorder prediction 720 745 - -
Bisa08g2709 745 MobiDBLite consensus disorder prediction 1 385 - -
Bisa08g2709 745 SUPERFAMILY Protein kinase-like (PK-like) 391 696 IPR011009 -
Bisa08g2709 745 MobiDBLite consensus disorder prediction 187 272 - -
Bisa08g2709 745 SMART serkin_6 399 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2709 745 MobiDBLite consensus disorder prediction 284 331 - -
Bisa08g2709 745 Gene3D Transferase(Phosphotransferase) domain 1 482 724 - -
Bisa08g2709 745 Gene3D Phosphorylase Kinase; domain 1 385 481 - -
Bisa08g2709 745 FunFam Cyclin-dependent kinase G-2 482 721 - -
Bisa08g2709 745 FunFam cyclin-dependent kinase G-2 isoform X1 384 481 - -
Bisa08g2709 745 MobiDBLite consensus disorder prediction 720 734 - -
Bisa08g2709 745 Pfam Protein kinase domain 399 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa08g2709 745 ProSiteProfiles Protein kinase domain profile. 399 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2709 Bisa-ChrBisa08 62446398 62449554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2709 382 736 Core Cell Cycle Gene Families AT5G10270 44.909 1.23e-94 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Bisa08g2709 Pkinase 1.2e-74 CL0016