Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2707 ATGCAGTCCGATTCAGACTCAGACGGATCTCATGTCTCTGCGACGCCTCCCAGAGAAGAACGTCCATCATCATTTCCTGCACCGCCGCCGCCGCGGCCATCTGTTATCGTCTCCAAAAAATTCAAAGCGTCTTCCTCACCCAGCTCCAAATCTTCAAAATCCAAAGTACGCCCTTCAAAACTAACCAAACCGCAATCCACTCAAGAAGAATTGCCCTCTAGCCCCTTTTGCCTCCCTACTTTACCCTTCCAAATTCGTCGGCCTTCTGACTCTGTTCCCGCACTTCCAACTGCCCAGTCCATTGAAAACCTCCCAGCTGGGTACTTCTCCAAATCAGCCTCATTCTCGAAAAGTCGAAGGCCCTTCCTCAATTTTGTAGATTCTTCTGGAAATGAGCCATCTCTTGATTCTGTATCAAATCCAGGCCCAAAGAACGAGAGCAATGAGATTTATTGTCGGCAGGGTTATTCTATCTCAGCAGAAGTAGAACGTGAAAGTCAAAATCCAAGGAACTTGGCAAAAGTAGGAAAGAGACATTCTAATCTGATAGGAGCTAATGTGCCAGCGCCACCAGTTAAGCTGAGAAAATGTGGTGGCGAGGCCAACTTTGTGAGGTTGAACATGAATAGCAAGAGCCGGAAGTTTCTGAACAAGGGAAGCAAGAAAAATTTTACATATAGTAGACGTAGGAGTTACATGAGAAATAGAGGTAAACCTAAGCATGAAGGACTGAATCAAATGCAGTCGGTCTTTAAGTCTGAGGAGGATGCGTTTGTTGCACAGACGGCACAAAAGAAATTCAGGAATTCTTGTGGAACGAAAGAATTTGATTGCAAAATTATTGAAGAAGCGGTTTCAGCAGTTCGAGATGACCCATCTGATGAGAACTTGGTGAACTTGCTAAATTTAGTTTATGGTTATGATTCTTTTCGGGATGGGCAGTTGGAGGCAATCAGGATGGCACTTGCTGGGAACTCCACGATGCTAATTTTGCCCACTGGTGCAGGGAAGTCCCTGTGTTATCAGTTACCTGCAATGATTTTTCCTGGGATTACCCTGGTTGTCAGTCCATTGGTAGCCTTGATGATTGATCAACAAAGACAATTGCCTCCTATCATTAATGGTGAACTTCTCTGCAGCAGTCAGACACCTGAAGAAGCCTCTGAAACGCTGAAGCAGATTCAAGAAGGTGCAATAAAGGTGCTTTTTGTTTCACCGGAGAGGTTCCTAAATGAAGAGTTTCTGTCAATAATATCGACTACTTCAGCTGTATCTCTTGTTGTGATTGATGAAGCACATTGTATATCTGAATGGTCACACAATTTTCGCCCTTCATTCATGAGGCTCACGGCATCTTTGCTCCATAACAAGCTCAATGCTGGCTCTATCCTTGCAATGACAGCGACAGCTACAACTACAACTTTAGATTCCATCATGTCTGCTCTAGATATTCCTCGCTCGAATCTTATTCAGAAGACAGAGTTAAGGGACAATATGCATTTATCAGTATCTTTAACAAAAAATAGAATGAAAGACCTATTGATGCTGATCAAGTCTCCTCCATTTGTGGAAGTTCAAAGCATCATCATATACTGCAAATTTCAGTCTGAAACTGATATAATTAGCAGATACTTGAATGACAACAATATCTCTGCAAAGAGTTACCATAGTGGTATCACTGCAAAGGAGCGTAGCTATGTACAGGAGTTGTTTAGTTCCAACAAGATCAGAGTGGTCGTTGCAACTGTGGCATTTGGCATGGGACTAGACAAAGGGGACGTTGGAGCTGTAATTCATTACAGTCTGCCAGAAAGTCTGGAGGAGTATGTGCAGGAGATTGGACGTTCTGGAAGGGATGGGAGGTTGTCCTTTTGCCACCTGTTTTATGATGAGGAGACCTATTTTAAACTCCGTAGTCTATTGTACAGTGATGGAGTAGATGAATATGCAGTAAACAAATTTCTGCGTGAAGTATTCCCTGCTGACAGAATTTCCAATGGGCAAATATGTTCCCTGGTCAAAGAATCTGCTTCGCGCAGGTTTGACATGAAAGAAGAGGTGATGCTCACACTTTTGACACGCTTGGAGTTGGGTGATGTGCAATACTTACGTTTACTTCCACAGATAAATGCAACATGCTCTTTGAATTTTCACAAGACTCCCCCTACATTGCTTGCCCAAAAGGCTTCTGCTGTTGCTACAATACTGAAAAGGTCTGAAAATAAGCAAGGGCTATATGTTTTTGACATGTCCTGTGTGGCGAATGACTTGGGGGTTACAGCTGTTGAATTATCAAATCAGTTGCACAACCTAAAGTTGATTGGAGAAATAACCTATGAGATGAAGGACTTAGCCTTTTGTTATAGGTGTGTCAAGGCACCAACGGATTTCTTTTCACTGTCGGCAGATCTTACACAATGGTTATATGAAGTTGAAAGATCAAAGGTACGGAAACTGGATGCAATGTTCAATGTTGCACATTTTGCAGTAAATACTTGTGATGAGATGCATGGTTGCAGTGGTTCCAATCACACACCGTGCTTGCAAAGGAAGATAATGGATTACTTTGCAGGAGTTGAAAATAATTACTTCTCCAAGAAGATGGATCAAAGCAGTCCTTTCTTGCGAGCAGATATGAAGGTCTTTCTACAGAGCAACTCGCAGGCCAAATTCACTCCGAGAGCCATTGCAAGGATAATGCATGGAATTGCAAGCCCATCCTACCCTTCTACAGCTTGGTCTAAAACTCATTTCTGGGGAAGGTATAGGCATGTAGACTTTCAGGTGGTGATGGAAGCAGCAAGGGAAGAACTTAAGAATTTTGTTGGAAAAGACACTGTCTAA 2844 0.4286 MQSDSDSDGSHVSATPPREERPSSFPAPPPPRPSVIVSKKFKASSSPSSKSSKSKVRPSKLTKPQSTQEELPSSPFCLPTLPFQIRRPSDSVPALPTAQSIENLPAGYFSKSASFSKSRRPFLNFVDSSGNEPSLDSVSNPGPKNESNEIYCRQGYSISAEVERESQNPRNLAKVGKRHSNLIGANVPAPPVKLRKCGGEANFVRLNMNSKSRKFLNKGSKKNFTYSRRRSYMRNRGKPKHEGLNQMQSVFKSEEDAFVAQTAQKKFRNSCGTKEFDCKIIEEAVSAVRDDPSDENLVNLLNLVYGYDSFRDGQLEAIRMALAGNSTMLILPTGAGKSLCYQLPAMIFPGITLVVSPLVALMIDQQRQLPPIINGELLCSSQTPEEASETLKQIQEGAIKVLFVSPERFLNEEFLSIISTTSAVSLVVIDEAHCISEWSHNFRPSFMRLTASLLHNKLNAGSILAMTATATTTTLDSIMSALDIPRSNLIQKTELRDNMHLSVSLTKNRMKDLLMLIKSPPFVEVQSIIIYCKFQSETDIISRYLNDNNISAKSYHSGITAKERSYVQELFSSNKIRVVVATVAFGMGLDKGDVGAVIHYSLPESLEEYVQEIGRSGRDGRLSFCHLFYDEETYFKLRSLLYSDGVDEYAVNKFLREVFPADRISNGQICSLVKESASRRFDMKEEVMLTLLTRLELGDVQYLRLLPQINATCSLNFHKTPPTLLAQKASAVATILKRSENKQGLYVFDMSCVANDLGVTAVELSNQLHNLKLIGEITYEMKDLAFCYRCVKAPTDFFSLSADLTQWLYEVERSKVRKLDAMFNVAHFAVNTCDEMHGCSGSNHTPCLQRKIMDYFAGVENNYFSKKMDQSSPFLRADMKVFLQSNSQAKFTPRAIARIMHGIASPSYPSTAWSKTHFWGRYRHVDFQVVMEAAREELKNFVGKDTV 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2707 947 MobiDBLite consensus disorder prediction 127 149 - -
Bisa08g2707 947 Pfam Helicase conserved C-terminal domain 525 619 IPR001650 -
Bisa08g2707 947 FunFam ATP-dependent DNA helicase Q4 278 488 - -
Bisa08g2707 947 Gene3D - 496 687 IPR027417 -
Bisa08g2707 947 FunFam ATP-dependent DNA helicase Q-like 5 496 687 - -
Bisa08g2707 947 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 425 434 IPR002464 -
Bisa08g2707 947 MobiDBLite consensus disorder prediction 39 74 - -
Bisa08g2707 947 MobiDBLite consensus disorder prediction 21 35 - -
Bisa08g2707 947 CDD DEXHc_RecQ4-like 298 491 - -
Bisa08g2707 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 638 IPR027417 -
Bisa08g2707 947 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 509 659 IPR001650 -
Bisa08g2707 947 SMART helicmild6 539 620 IPR001650 -
Bisa08g2707 947 NCBIfam RecQ family ATP-dependent DNA helicase 300 647 IPR004589 GO:0004386|GO:0006310
Bisa08g2707 947 CDD SF2_C_RecQ 496 629 - -
Bisa08g2707 947 Pfam DEAD/DEAH box helicase 312 474 IPR011545 GO:0003676|GO:0005524
Bisa08g2707 947 SMART ultradead3 306 495 IPR014001 -
Bisa08g2707 947 MobiDBLite consensus disorder prediction 1 75 - -
Bisa08g2707 947 Gene3D - 281 488 IPR027417 -
Bisa08g2707 947 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 318 488 IPR014001 -
Bisa08g2707 947 PANTHER DNA HELICASE RECQ FAMILY MEMBER 284 832 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2707 Bisa-ChrBisa08 62431055 62437966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2707 529 652 Eukaryotic Initiation Factors Gene Family AT3G19760 32.540 9.27e-14 72.4