Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2705 ATGGCTTCCATTGGCGGATCAAACTGTGTCGCTTTCAAAACCGCAGCTGTCTCACACAAGTTTGGAGATATCAAGAAAGTCGGTCATTTTCAATGGTCTCCGATCCTCGGAGCCAAAGTGAATCAGCTACGTCCCCTTTTGGGTCTCCACTGTAGATCCAATTCTTCGTTCGGATCGTCTGGTATTAGAGCTCAGGTCGCTACTCTTGAAGAAGCAGGATCCGGAGTGGCCCAAAATGTGGAATCGCCTGTTGTTGTAGTGACTGGAGCCTCCAGAGGTATTGGCCGAGCAATTGCATTGTCTTTGGGTAAAGCAGGTTGCAAGGTCCTGGTTAATTATGCGAGATCATCCAAGGAAGCAGAGGAGGTTTCCAAGGAGATTGAGGCATGTGGTGGACAGGCTCTTACATTTGGGGGAGATGTTTCTAATGAGGCAGATGTGGAGTCTATGATTAAAACTGCAGTTGATGCTTGGGGAACTGTTGATGTGTTAGTAAACAATGCAGGAATCACTAAGGATGGTTTATTAATGAGAATGAAGAAATCTCAATGGCAGGATGTTATAGATCTGAATCTCACTGGTGTTTTCCTCTGCACCCAAGCAGCAGCTAAGATTATGATGAAGAAAAAGAAGGGAAGGATAATCAACATTGCATCAGTTGTTGGTCTAGTTGGAAATGTTGGACAAGCCAATTATAGTGCTGCCAAAGCAGGAGTAATTGGCCTGACAAAAACCGTTGCAAGGGAATATGCTAGCAGAAACATCAATGTCAATGCGGTTGCTCCAGGGTTTATTGCTTCTGATATGACTGCCAAGCTAGGAGAGGACATTGAGAAAAAGATTTTGGAGACAATCCCCTTAGGAAGATATGGGCGACCAGAAGAAGTTGCTGGACTGGTGGAATTCTTGGCTCTTAATCCTGCTGCCAGTTACATCACAGGACAGGTGTTAACTATTGATGGAGGAATGGTGATGTAA 978 0.4489 MASIGGSNCVAFKTAAVSHKFGDIKKVGHFQWSPILGAKVNQLRPLLGLHCRSNSSFGSSGIRAQVATLEEAGSGVAQNVESPVVVVTGASRGIGRAIALSLGKAGCKVLVNYARSSKEAEEVSKEIEACGGQALTFGGDVSNEADVESMIKTAVDAWGTVDVLVNNAGITKDGLLMRMKKSQWQDVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVGNVGQANYSAAKAGVIGLTKTVAREYASRNINVNAVAPGFIASDMTAKLGEDIEKKILETIPLGRYGRPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2705 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 325 IPR036291 -
Bisa08g2705 325 Gene3D - 82 325 - -
Bisa08g2705 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 170 IPR002347 -
Bisa08g2705 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 212 220 IPR002347 -
Bisa08g2705 325 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 232 251 IPR002347 -
Bisa08g2705 325 PRINTS Glucose/ribitol dehydrogenase family signature 253 270 IPR002347 -
Bisa08g2705 325 PRINTS Glucose/ribitol dehydrogenase family signature 286 306 IPR002347 -
Bisa08g2705 325 PRINTS Glucose/ribitol dehydrogenase family signature 232 251 IPR002347 -
Bisa08g2705 325 PRINTS Glucose/ribitol dehydrogenase family signature 159 170 IPR002347 -
Bisa08g2705 325 PRINTS Glucose/ribitol dehydrogenase family signature 206 222 IPR002347 -
Bisa08g2705 325 PRINTS Glucose/ribitol dehydrogenase family signature 84 101 IPR002347 -
Bisa08g2705 325 CDD BKR_SDR_c 84 324 - -
Bisa08g2705 325 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE 79 324 - -
Bisa08g2705 325 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 83 268 - -
Bisa08g2705 325 NCBIfam 3-oxoacyl-[acyl-carrier-protein] reductase 85 324 IPR011284 GO:0004316|GO:0006633|GO:0051287
Bisa08g2705 325 Pfam Enoyl-(Acyl carrier protein) reductase 89 323 - -
Bisa08g2705 325 FunFam 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic 82 325 - -
Bisa08g2705 325 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 219 247 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2705 Bisa-ChrBisa08 62408327 62411777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2705 39 325 Acyl Lipid Metabolism Gene Families AT1G24360 70.707 7.38e-153 429