Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2700 ATGGCTGATGTGGATTGTCTGTGTGTTTATATAAGAATTGATGAAGAAGCCACTGTTGTACTGACCTCTGAAATGGCTGTAATTTTGGATACTCCATTGGGAATACTCAATGCCACATTCTTCATTGCGATTTTGATATGGGTTCTGGTCGATAGTTTGAGAGAAAGCAGACGTAACGGTGTTGTATATGTGAAGCACGTACCGAAACGATTTGCCGTTTTCACCACGCTCACACTTTTCTGTAATGCTGTTCTTTCGGTTTTCAACTTTGGTGTCGCGTTTCATCAATACAAAGCTCGAAAAATCGTGTCGTATTACTCTGTTTTCTTGGCTTTCACTTGGGTTTTAGCCACCATAGTTTCGGTATACTCAGTGAAGAGATTACTCAGAGAGAGTAAAAAATGGCCCCTCGTGTTGATACTCTGGTGGTTCTTCGCCACTTTCTTGGATTCACTCTTTGTTTCTTTGAAACTCATCAAGAATTTCAAATCCTTGGATTTGTCTTTCTTCCTTTCAGAGGATAACTTGGCGGATTTCGTTTCCTTTCCTCTGTTGTTGCTCCTCTGTTTCAATGCTATTCCTGCTATATGGGCAAGGGAATACAGTGAATCTGAACAAGTCTTGCTTGAGAAAGAGGTAGAAGAAGAAGATGAAGAGACATTCTCAAATGCTGGGATATGGAGCAAGCTCACATTTCAATGGCTAAACCCCATTTTTAGAAGGGGTCAGATTCAAAAGCTTGAACATTCTAATATCCCTTCAGTTCCTCCATCTGAAGCAGCAGAAAATGCTTCTTCCATGTTGGAAGATTCACTCAGAAAACAAAAGCTTGAAACTGGGTCCTTGACTAAAGCCATAGCCCATTTTATCTGGAAATCCTTGACCTTAAATGCAGTTTTTGCAGGTGTAAACACGATTGCATCTTATATGGGTCCCTTGTTGATCACAAACTTTGTGAATTTCTTATCGGGAAATTATGATGATGATTCCAGCATCCACTATGGGCTAATTCTTGCGTTCATTTTCTTCTTCGCGAAAACTGTGGAATCATTGACTCAAAGACAATGGTACTTTGGTGCTCAACGGATAGGAATTCAAGTGCGTGCGGCTCTCACAGTGCTGATATACAGCAAGTCACTGTCAATCAAGTGTGGTGGACCAAGAAATGGTAAAATCATAAACTTGATCAATGTGGATGTTGAAAGAATTGGGGATTTCTGCTGGTTCATCCATGGAGTATGGTTGCTTCCAGTTCAGGTGGTTCTGGCCTTGGTCATCTTGCACAGGAATTTAGGGTTTGCACCTTCCATTGCTGCACTTGCTGTGACTATTCTGGTCATGGTGTGCAATACTCCTATGGCCAATATGCAGGAAAGACTCCACTCCAAGATCATGGAAGCTAAGGATTCAAGGATCAAAGTGACTTCAGAGACTTTAAAGAACATAAGAATTCTGAAATTGCATTCATGGGAATCCACATTCTTGAAGAAACTCCTTCAGCTTCGGGAAACTGAGAGGAGCTGGCTGAAGAAATACCTATATACCTGTTCAGCAGTGACCTTTCTGTTTTGGACATCCCCAACTCTTGTTTCTGTGGTCACTTTTGGTGTCTGTATACTGGTGAAAACAGAATTAACTTCAGCTACAGTTCTCTCGGCTTTAGCGACTTTCCGTATACTACAAGAACCAATCTACAACTTACCTGAGCTTATTTCCATGATAGCTCAAACAAAAGTGTCACTTGGTAGGATCCAGGAGTTCATTAAAGAAGAGGATCAAAAGCAGTTCATGCTTAAGCATAATTCAAAGTCTTCTGATATTGCTATTGATGTCAAAACAGGTGAGTATTCATGGGAAGAAGATGATGATCAATACCACAAGAAACCCACAATTCAGATTACAAAGAAGTTGAAGATAGAGAAAGGTCAAAAGGTAGCAGTTTGTGGGTCTGTGGGTTCTGGTAAATCAAGCCTATTGTGCTGTATGCTTGGCGAGATTCCGAGGGTTTCTGGGGCAGGAATCAAAGTCTATGGAAGTACAAGTTATGTACCTCAAAGTCCTTGGATTCAGTCAGGGACTGTGAGGGAAAATATAATGTTTGGCAGGCAAATGAAAAAGGACTTGTATGAAAAGGTTCTGGAAAGCTGTGCTTTGCACCAGGATATCAAAATTTGGCCAGATGAAGATTTGACCGTCGTGGGGGAGAGAGGCATAAACTTAAGCGGAGGCCAAAAACAGAGAATTCAACTGGCAAGGGCTGTTTACAATGATTCAGATATTTATTTCCTGGATGATCCTTTCAGTGCTGTCGATGCTCATACTGGAACACATTTGTTTAAGAAATGTCTTATGCAACATTTATCTGAGAAAACGGTTGTTTATGCTACCCATCAACTGGAATTTCTGGAAGCTGCAGATCTGATATTAGTATTGAAAGATGGGAAAATAGTTGAGTCAGGAAAGTATAAAGATCTAATTGCATGTCCCAGCTGTGAACTTGTTCAGCAAATGGCTGCTCATAAAGAAACAATAAAGCAAATCAATCCATGCCAAGAAGATAAATCCAAGAGCATTAGACACTGCAGTCAGATAAACCAAATTGAAGTTGCTGAAGAGAATCTTAACGAGACCCTCCAAGAGGACCGGAAGCATTTGGACCGGAACAAAAAGGAGGAAGCCGAGATGGGCCGAGTCGACTGGAGTGTTTACTCAACATTTGTGACATTTGCTTATGGAGGAGCATTTGTTCCCATTGTTCTTCTGTGCCAAATTCTCTTTCAAGGACTACAAATTGGAAGCAATTATTGGGTTGCTTGGGCTACAGAACAAAGAAGCACTGTCAGTAAAGGGCAGCTTATAGGGACATTTGTTCTTCTATCCGGAGCCAGTTCCATCTTCATACTTGGAAGGGCTGTTTTAATGGCAACAATTGCTGTAGAGACAGCTCAACGTCTTTACCATGAAATGATCACATCAGTTTTCAGAGCTTCTGTTTCATTTTTTGATACCACACCTTCAAGCAGAATCCTGAATAGGTCTTCTATAGATCAAAGTACAGTAGACACAGATGTACCATACAGATTAGCAGGACTTGTATTTGCACTTATCCAGTTATTGAGTATCATCATCCTAATGTCTCAAGTTGCTTGGCAAGTCATTCTTTTCTTTCTTGTTGTGCTTGCCATTTCCATCTGGTATCAGGCTTATTACATTACTACTGCCAGAGAATTGGCGAGATTGGTAGGAATTCGAAAAGCTCCAATCTTGCATCACTTCTCAGAGTCAATTGCCGGCGCTGCCACAATCCGTTGTTTCAATCAAGAGAAAAGATTTCTGCGGAAAGTTATGGCTCTAACTGATGATCATTCTTGCGTGGCCTTTCACAATTATGCCACCATGGAATGGTTGTCAATCCGAATAAACTTCCTCTTTAACCTCGTGTTCTTTTTCGTTCTCATCATCTTGGTCACTCTTCCGAGGTCTGCCATTGATCCCAGCTTGGCGGGTTTGGTGGCTACTTATGGTTTGAACTTGAGTGTTCTTCAGGCCTGGGTTATATGGAACCTCTGCAATGTGGAGAACAAGATGATATCAGTTGAGAGAATATTGCAGTTCACAAAGATACCTAGTGAGGCTCCATTGATAATTCAAGAATGCCGGCCCGAGCCGGAGTGGCCGAGGGAGGGAAAAATTGAATTTGATAACCTTCATATACAGTATGATCTTGCAGCTCCTATGGTGCTCAAAGGTGTCACATGCACCTTCCCAGGGCAAAAGAAGATTGGAGTTGTGGGAAGGACAGGAAGTGGAAAATCCACTTTAGTGCAAGCTCTCTTTAGAGTGGTGGAGCCTTCACGGGGAAAGATAGTCATTGATAATGTAGATATTTGCAAGATTGGTCTCAAGGATTTAAGGTCTAGGCTTGGTATAATTCCTCAAGATCCTACCTTGTTTCAAGGGACTGTAAGGAATAACTTGGATCCTCTGGAACAACATTCAGATCAAGAACTCTGGGAGGTTCTCGGGAAGTGCCATCTTGCTGAAATAGTGAGGAAGGATGCAAGGCTTCTTGATGCATCAGTGGCTGAGAATGGAGAAAATTGGAGTGTTGGACAAAGACAACTTGTTTGCCTGGCCAGGCTCCTATTGAAGAAAAGGAAAATTTTGGTTCTAGATGAGGCAACGGCATCCATTGACACAGCAACTGATAATTTAATTCAAAAGACTATAAGGGAAGAGAGCAATGGATGCACAGTCATTACAGTGGCACATAGGATTCCTACAGTCATTGATACTGACTTTGTATTGGTCCTTGATGAAGGGAAGATTGCAGAGTTTGATCACCCAGCTCAGTTACTACAGAACAGTTCTTCAGCATTCTCAAAGTTGGTGTCCGAGTTCACAAGGAGATCATCCCAGAGTAATTGCCAAAGGGATACATGA 4443 0.4159 MADVDCLCVYIRIDEEATVVLTSEMAVILDTPLGILNATFFIAILIWVLVDSLRESRRNGVVYVKHVPKRFAVFTTLTLFCNAVLSVFNFGVAFHQYKARKIVSYYSVFLAFTWVLATIVSVYSVKRLLRESKKWPLVLILWWFFATFLDSLFVSLKLIKNFKSLDLSFFLSEDNLADFVSFPLLLLLCFNAIPAIWAREYSESEQVLLEKEVEEEDEETFSNAGIWSKLTFQWLNPIFRRGQIQKLEHSNIPSVPPSEAAENASSMLEDSLRKQKLETGSLTKAIAHFIWKSLTLNAVFAGVNTIASYMGPLLITNFVNFLSGNYDDDSSIHYGLILAFIFFFAKTVESLTQRQWYFGAQRIGIQVRAALTVLIYSKSLSIKCGGPRNGKIINLINVDVERIGDFCWFIHGVWLLPVQVVLALVILHRNLGFAPSIAALAVTILVMVCNTPMANMQERLHSKIMEAKDSRIKVTSETLKNIRILKLHSWESTFLKKLLQLRETERSWLKKYLYTCSAVTFLFWTSPTLVSVVTFGVCILVKTELTSATVLSALATFRILQEPIYNLPELISMIAQTKVSLGRIQEFIKEEDQKQFMLKHNSKSSDIAIDVKTGEYSWEEDDDQYHKKPTIQITKKLKIEKGQKVAVCGSVGSGKSSLLCCMLGEIPRVSGAGIKVYGSTSYVPQSPWIQSGTVRENIMFGRQMKKDLYEKVLESCALHQDIKIWPDEDLTVVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMQHLSEKTVVYATHQLEFLEAADLILVLKDGKIVESGKYKDLIACPSCELVQQMAAHKETIKQINPCQEDKSKSIRHCSQINQIEVAEENLNETLQEDRKHLDRNKKEEAEMGRVDWSVYSTFVTFAYGGAFVPIVLLCQILFQGLQIGSNYWVAWATEQRSTVSKGQLIGTFVLLSGASSIFILGRAVLMATIAVETAQRLYHEMITSVFRASVSFFDTTPSSRILNRSSIDQSTVDTDVPYRLAGLVFALIQLLSIIILMSQVAWQVILFFLVVLAISIWYQAYYITTARELARLVGIRKAPILHHFSESIAGAATIRCFNQEKRFLRKVMALTDDHSCVAFHNYATMEWLSIRINFLFNLVFFFVLIILVTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLIIQECRPEPEWPREGKIEFDNLHIQYDLAAPMVLKGVTCTFPGQKKIGVVGRTGSGKSTLVQALFRVVEPSRGKIVIDNVDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDQELWEVLGKCHLAEIVRKDARLLDASVAENGENWSVGQRQLVCLARLLLKKRKILVLDEATASIDTATDNLIQKTIREESNGCTVITVAHRIPTVIDTDFVLVLDEGKIAEFDHPAQLLQNSSSAFSKLVSEFTRRSSQSNCQRDT 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2700 1480 FunFam ABC transporter C family member 5 879 1212 - -
Bisa08g2700 1480 SMART AAA_5 641 815 IPR003593 GO:0016887
Bisa08g2700 1480 SMART AAA_5 1257 1442 IPR003593 GO:0016887
Bisa08g2700 1480 Coils Coil 871 895 - -
Bisa08g2700 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 828 IPR027417 -
Bisa08g2700 1480 CDD ABCC_MRP_domain1 609 815 - -
Bisa08g2700 1480 Gene3D - 1214 1467 IPR027417 -
Bisa08g2700 1480 SUPERFAMILY ABC transporter transmembrane region 918 1211 IPR036640 GO:0005524|GO:0016020
Bisa08g2700 1480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1457 IPR027417 -
Bisa08g2700 1480 Pfam ABC transporter transmembrane region 933 1158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2700 1480 Pfam ABC transporter transmembrane region 295 563 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2700 1480 SUPERFAMILY ABC transporter transmembrane region 290 591 IPR036640 GO:0005524|GO:0016020
Bisa08g2700 1480 FunFam ABC transporter C family member 10 278 592 - -
Bisa08g2700 1480 CDD ABC_6TM_ABCC_D1 296 584 IPR044746 GO:0140359
Bisa08g2700 1480 FunFam Multidrug resistance-associated protein 4 594 855 - -
Bisa08g2700 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 918 1194 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2700 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1231 1465 IPR003439 GO:0005524
Bisa08g2700 1480 Gene3D - 626 868 IPR027417 -
Bisa08g2700 1480 CDD ABCC_MRP_domain2 1229 1449 - -
Bisa08g2700 1480 ProSitePatterns ABC transporters family signature. 740 754 IPR017871 GO:0005524|GO:0016887
Bisa08g2700 1480 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 298 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2700 1480 FunFam ABC transporter C family member 3 1214 1466 - -
Bisa08g2700 1480 Pfam ABC transporter 1248 1396 IPR003439 GO:0005524
Bisa08g2700 1480 Gene3D ABC transporter type 1, transmembrane domain 273 595 IPR036640 GO:0005524|GO:0016020
Bisa08g2700 1480 Gene3D ABC transporter type 1, transmembrane domain 878 1212 IPR036640 GO:0005524|GO:0016020
Bisa08g2700 1480 CDD ABC_6TM_ABCC_D2 916 1206 IPR044726 GO:0140359
Bisa08g2700 1480 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 611 838 IPR003439 GO:0005524
Bisa08g2700 1480 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 222 1471 - -
Bisa08g2700 1480 Pfam ABC transporter 636 767 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2700 Bisa-ChrBisa08 62316045 62323862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2700 598 867 Calmodulin-binding Proteins AT2G36910 28.322 6.90e-22 101