Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2698 ATGTATTTATCAGAAAAGCCCCGCCCTATCGATTTCTACAAAGAAGAAGGGAGCCGAGACATGATGATCGAGGTTGTCTCCAATGGCGAACTCCCACCACCTCACCAGCAACCCCCGCAGCATCAGATGATTCTTGGCGAGAGTAGTGGGGAGGACCACGAAGTTGAAATCAAAGCTCCCAAGAAGCGTGCTGAGACTTGGGTTCAGGAAGAGACGCGCAGTTTGATTGCCCTTCGCCGGGAGATGGATGGTCTTTTTAATACATCCAAGTCCAACAAACATTTGTGGGAACAAATATCGGCAAAGATGAGAGAGAAGGGGTTCGATCGGTCGCCCACTATGTGCACGGACAAATGGAGAAACCTGTTGAAAGAGTTCAAGAAAGCGAAGCACCAGGATAGGGGAAGTGGGTCTGCTAAGATGTCGTATTATAAAGAGATTGAGGAGATTCTAAGGGAGAGGAATAAGAGTATGCAGTATAAGAGCCCTACTCCTCCGAAAGTTGATCCTTATATGCAATTTGCCGATAAAGGTATTGAGGATACCAGCATCTCGTTTGGCCCAGTTGAAGCTACTGGCAGACCAACACTCAATCTTGAGAGACGTTTGGATCATGATGGACATCCTCTTGCCATCACTGCAGCTGATGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTGGAGAAGGTCAGTCGTGTTGTGGGAGGGTTATATCAGTCAAATGGGGTGATTATACAAGAAGAATAGGTATTGACGGCACTTCAGAAGCCATCAAAGAGGCAATAAGGGCTGCTTTTAGGTTGAGAACTAGACGTGCATTTTGGTTGGAGGATGAAGACCAGATAATTAGAAGTCTTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCGGTTAAAGTATGCCTCTATGATGAGTCTGACCATATCCCTGTGCATACTGAAGATAAGATCTTTTACCATGAAGAGGATTATCGTGATTTTCTGACACGGCGGGGCTGGACATGTCTAAGGGAATTTGATGGCTATAGAAACATTGATAATATGGATGATCTTCGGCCCGGTGCCATATACCGTGGTGTGAGTTGA 1131 0.4607 MYLSEKPRPIDFYKEEGSRDMMIEVVSNGELPPPHQQPPQHQMILGESSGEDHEVEIKAPKKRAETWVQEETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILRERNKSMQYKSPTPPKVDPYMQFADKGIEDTSISFGPVEATGRPTLNLERRLDHDGHPLAITAADAVAASGVPPWNWRETPGNGGEGQSCCGRVISVKWGDYTRRIGIDGTSEAIKEAIRAAFRLRTRRAFWLEDEDQIIRSLDRDMPLGNYTLHLDEGMAVKVCLYDESDHIPVHTEDKIFYHEEDYRDFLTRRGWTCLREFDGYRNIDNMDDLRPGAIYRGVS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2698 376 PANTHER FI21293P1 42 374 - -
Bisa08g2698 376 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
Bisa08g2698 376 Gene3D - 67 129 - -
Bisa08g2698 376 SMART sant 63 125 IPR001005 -
Bisa08g2698 376 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Bisa08g2698 376 FunFam trihelix transcription factor GT-1 67 129 - -
Bisa08g2698 376 CDD GT1 65 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2698 Bisa-ChrBisa08 62291387 62296524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2698 1 375 Trihelix Transcription Factor Family AT3G25990 70.619 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa08g2698 Myb_DNA-bind_4 6.7e-21 CL0123