Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2686 ATGGACAATGCTTTCTCATCTCCGCGTCGAGATACTTTTCCGGCTGGTCTCAGAGTTCTCGTCGTTGACGATGATCCAACGTGGCTGAGGATCCTTGAAAAGATGCTCAAGAAGTGCTCCTATGAAGTGACTACATGTGGTTTAGCAAGAGAGGCTTTAAACTTGCTTCGTGAAAGAAAAGATGGGTATGACATTGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTTAAACTTCTCGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATCATGATGTCTGTAGACGGAGAAACAAGCAGGGTGATGAATGGTGTTCAACATGGAGCATGTGATTATCTCCTGAAGCCAATACGAATGAAAGAGCTGCGAAACATATGGCAACATGTATTTAGAAAGAGGATACATGAGGCAAGAGAATTTGAAGGGCTCGAAGGCTTCGATGGCATTAACTTAATGAGAAATGGATCAGATCAGTCTGACGATGGGATCTTTTTTGCTGTAGAAGATATGACCTCCATGAAGAAAAGAAAAGATGTTGACAACAAGCATGATGACAAAGAATTTGGAGATCCATCTTCCACTAAGAAAGCTAGAGTGGTCTGGTCTGTGGATCTTCATCAGAAGTTTGTTAAAGCTGTGAATCAGATTGGATTTGATAAAGTTGGTCCCAAGAAAATACTAGATTTGATGAATGTTCCTTGGTTGACTAGAGAAAATGTTGCTAGCCACTTGCAGAAATACCGGCTGTACTTGATTAGGTTGCAGAAAGAAAACGATCCGAATTCTTCCTCAAGTGGGAATAAGCATTCAGATTTACCTCCAAAAGACACTGCAGGAAGTTTTGGTTTTCAGAACTCAACAAACAGGCAGCAAAATGATGTTGCAGTTGACAGCTACAAATATTCTGATGTACCATTAGAAAGTCAAAATGCTGAAGCTAAAAGTCACGAAGGTGACCTAAAGGGAATTGTCTCGGAGACCTCAACTGAAAGAAGAGCTTTGTCTAGCAGCATTCCTGATACAAAAATAACGAGTTCACATGTGGGCCTTAACCATTCTTCTTTTGGACCTCTAGAGTCAGAAGGAAGCCATACAGTATTTGATTGCACAATCCCAACACAGTACACTTGGAGTGAAGCTCCAGAATTGCAGCTCAAAAAGGAACACAAGCCACTTCTTCAGTTAGCGGATAGCTTCAGCCAATTACCATTACATGTTACGCAGCGTCACATTCAGATTGATCAATCACAATCAATTGCTTCAGTTAGCTCCAACCCCTCTATCACTGAGGGAGAGCTTGCAGCCTGTATTGACACTAAGCCTTTGTATGCTGATTACAAAAGTGATTATGCCAGTTCTGTGAGTTCAATGGGGAGTGCACGTGACACCTTTTCTATTCAATCCAAGAGCCTTGTGGAGAATGATCAGCCTTCAGAATCCATTTCAAATAAGAATGTGGGCATGAAAACACAGGGCTTTAATCTCAGTTGCATTTCTGAACCCAAAAACCTACTTATGGGAGGTGAGGTCGTTTCTGCGCCTTTGGACGAGGACTACTTGCAATTCTGTTGGCTGCAAGGTGAATGCTATAATATGAACTTGGGACTGCAGAGTATAGATATGCCAGAGTATCACGATCCAGGGCTTGTTGTGGAGATTCCAGCTCACTTATATGATTCATCAGATTATTCAGTAGTAGATCAAGGCCTATTCATAGTATAA 1731 0.4177 MDNAFSSPRRDTFPAGLRVLVVDDDPTWLRILEKMLKKCSYEVTTCGLAREALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMNGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFEGLEGFDGINLMRNGSDQSDDGIFFAVEDMTSMKKRKDVDNKHDDKEFGDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLIRLQKENDPNSSSSGNKHSDLPPKDTAGSFGFQNSTNRQQNDVAVDSYKYSDVPLESQNAEAKSHEGDLKGIVSETSTERRALSSSIPDTKITSSHVGLNHSSFGPLESEGSHTVFDCTIPTQYTWSEAPELQLKKEHKPLLQLADSFSQLPLHVTQRHIQIDQSQSIASVSSNPSITEGELAACIDTKPLYADYKSDYASSVSSMGSARDTFSIQSKSLVENDQPSESISNKNVGMKTQGFNLSCISEPKNLLMGGEVVSAPLDEDYLQFCWLQGECYNMNLGLQSIDMPEYHDPGLVVEIPAHLYDSSDYSVVDQGLFIV 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2686 576 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 305 IPR045279 GO:0009736
Bisa08g2686 576 SMART REC_2 17 129 IPR001789 GO:0000160
Bisa08g2686 576 SUPERFAMILY CheY-like 16 140 IPR011006 -
Bisa08g2686 576 PIRSF RR_ARR_type-B 1 545 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bisa08g2686 576 ProSiteProfiles Response regulatory domain profile. 18 133 IPR001789 GO:0000160
Bisa08g2686 576 Gene3D - 195 258 - -
Bisa08g2686 576 NCBIfam myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
Bisa08g2686 576 CDD REC_typeB_ARR-like 19 133 - -
Bisa08g2686 576 Pfam Response regulator receiver domain 19 128 IPR001789 GO:0000160
Bisa08g2686 576 MobiDBLite consensus disorder prediction 261 297 - -
Bisa08g2686 576 MobiDBLite consensus disorder prediction 282 297 - -
Bisa08g2686 576 Pfam Myb-like DNA-binding domain 201 251 IPR001005 -
Bisa08g2686 576 FunFam Two-component response regulator 17 179 - -
Bisa08g2686 576 Gene3D - 17 171 - -
Bisa08g2686 576 SUPERFAMILY Homeodomain-like 197 254 IPR009057 -
Bisa08g2686 576 FunFam Two-component response regulator 195 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2686 Bisa-ChrBisa08 62136259 62140353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2686 11 257 Response Regulator Gene Family AT2G25180 56.574 5.37e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa08g2686 Response_reg 2.5e-24 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2686 08 62136259 62140353 Bisa08g2686 08 62136259 62140353 ECH