Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2663 ATGGGGAAAAAAGGTGGATTTCTTCGTTATGCAGATGGTATGGACAAGTTGCTCTTAGTGTTTGGGGCATTGGGTTGCATAGGAGATGGCCTACAAACATCTGTCACTATGCTTGTTCTTGGCAGTTTGATTGATGACTATGCAGACCATACATCTGCCTCTGACAATGCTGCCTTCAACCATACTGTAGACAAGTATGCTCTCAGGCTGCTCTATATTGCCATTGGAGTGGGCCTATCTGCTTTTATTGAAGGAGTATGTTGGACAAGAACAGCAGAAAGACAAACATCTCGCATGAGAACTGCATATCTTAAATCAGTCCTTAGGCAAGAAGTGGGATTCTTCGACAACCAGACTGACTCCACCACCTTCCAAGTTATCTCCACCATTTCTTCTGATGCTCAAATAATCCAAGACACCTTGGCTGAAAAGGTACCAACTTGTTTGGTTCACCTCTCATCATTTTTCTCAAGCTTCATAGTGGCTTTGGTCCTTTCGTGGAGACTAGCAGTTAGTGCTTTTCCATTTTCAATCATAATGATAACGCCAACAATCATATTTGGGAAGGATCTTAAAGAGTTCGGAAAAAAGATGAAGGATGCTTATGCAGTTGCTGGCAGCATAGCAGAACAAGCAATCTCGTCAATTCGCACAGTATATTCATACGTAGGTGAGAAACAAACACTAGAAAGGTTTGGGTCTGCTCTTGAAACAAGCATGAAGCTTGGGATAAAGATAGGGTTAACGAAAGGGGTGGTGATTGGAAGCTTTGGGTTGATGTACGCAACTTGGGCATTCCAAACATGGGTCGGAAGCGTTTTGGTCACTGACAGGGGAGAAAGTGGTGGAAATGTATTTTGCGCCGAAATCTGTATCATCTGGGCAGGGTTGTCTCTGATGAGTGCGCTTCCGAGTCTTGCTTCCTTAGTGGAGGCAACAACAGCTGCTTCTCGAATTTACCAGATGATTGATCGAGTGCCTGCTATAAACTCTGAAAACGGAGAGGGGAAGCTCTTGAAGGATGCTAGAGGAGAGATCACATTCAAAGATGTTGAGTTTAGCTACCCATCAAGACCAGATACCCCAATTCTCAAAGGCCTCAATCTGAAACTGCGAGCAGGTAAAACAGTAGGCCTTGTTGGAGGGAGTGGTTCTGGAAAATCTACCATCATCTCTCTCATTGAAAGATTCTATGATCCTACAAATGGTAAAATATTGCTTGATGGGTATGATATAAATACACTTCACCTCAAGTGGTTAAGGTCCCAGATGGGATTGGTTAATCAAGAGCCTATTCTCTTTGCAACATCCATTAAAGACAACATTCTACTTGGCAACCCAGGAGCTTCAGTGGAAGCTGTTGAATCTGCAGCAATGGCTGCCAATGCACATGATTTCATAGTTAAACTTCCCCGTGGATATGACACTCAAGTAGGGCAACTTGGAGCTCAATTGTCTGGAGGGCAAAAACAGAGGATTGCTATAGCAAGAGCTTTAATCAGAAACCCTAGGATCCTACTGCTTGATGAAGCCACGAGTGCTTTGGATTCACAGTCTGAGAAATTAGTACAAGAAACCCTGGATTCGGCTTGCCGAGGAAGAACCACAATCATTGTAGCCCATCGCCTTTCCACAATTCGTAAGGCCGACACAATAGTGGTTCTTCAGTCGGGAAGAGTGGTGGAAAGTGGTTCCCACGATGAGCTGATCCAATTGAACAATGGGCAGGGTGGGACTTACAGCAAAATGCTGCAATTGCAACAATTAGCTGTTCAAGAAGAACGAGAATCAAAGCACTGCATAAGTGCTAGTCCACGAAATGTAGAAATTCGAAGAACTGCTTACTCAAGTTGGCAGAGCAGCCCAGCTGCGCCATTTAGCCCTATATATTCCATTAGTATTGCAGAGTCTCCCCTTGTACCCTCTTGGGATGATGATGACTACTACAACAAGAACCCTAACAAATCTTCTGATTCCGGATCAACTTTCTCGCAATGGCGTTTGTTACGAATGAATGTACCTGAGTGGAAGCATATTTTGCTAGGCTGTTTAGGAGCCGTTGGATCTGGAATATGCCAGCCAATTTACTCTTATTGCCTTGGAATAGTTGCGTCTGTTTACTTCATAAAAGACGAATCTCGTATCAAATCTGAAATCAGATTGTACTCAATCATCTTTTGCACGCTAGCCATTGTGAACATGATTTCAGGTCTCATTCAGCAATATAATTTTGCTATCATGGGAGAACGCTTGCTGAAAAGAGTGCGTGAAAATTTGCTAGCTAAGGTTTTGACCTTTGAGATAGGATGGTTTGATCAAGAAGATAACACTAGTGCAGCAATATGTGCAAAACTAGCTACTGAATCTAACTTGGTTCGATCTCTTGTTGCAGAACGAATGTCTTTATTGGTTCAAGTTTTCTTCATGGCGTCCCTCGCTTTTATACTTGGCTTAGTCGTTTCATGGAGGGTGGCCATTGTGATGATCGCCATGCAGCCTTTGATCATTGCTTGTTTCTATTCAAAAAGCATTTTGATGAAAAGTATGTCAGGCAAAGCTCAAAAGGCTCACAGAGAAGGTAGTCAGTTGGCAATGGAAGCCACCATCAATCACAGGACTATTACTGCATTTTCATCCGAGAAAAGGATACTAAATTTGTTTAAAATTGCCATGAAAGGCCCTCAAAAGGAAAGCATTAGGCAGTCATGGATTTCAGGTTCCATCATGTCAATCTCTCAGTTTTTGACCACTGCATCTATAACCCTGACTTTTTGGTATGGAGGGAGGCTATTGAATCAAGGTTTGATAGAATCAAAGAACCTTTTACAGGTTTTTCTTATCTTGATGGGCACTGGTAGACAAATTGCAGAGACGGGAAGCATGACTTCTGATATAGCCAAAAGTGGAGGAGCCATTGGTTCAATTTTTGCAATCCTGGACAGGAAAAGTCAAATTGAGCCTGAAGATGGTGCTACACTTAAAAAGTCTGGAAAGACTATAAAGGGTAACATAAAGCTAAAAGATGTCTTTTTCTCATATCCAGCAAGGCCCGATCAAATGATACTCAAGGGCCTAAGTCTTGAGATTGAAGCTGGGAAAACAATAGCATTAGTGGGACAGAGTGGCTCAGGGAAATCCACCATCATTGGGTTAATTGAAAGGTTCTATGACCCCGCGAAGGGATCAATATCCATAGATAATTGTGACATAAAGGAATTTAATGTAAGAAAGTTGAGGTCACAGATTGCCTTAGTGAGTCAAGAGCCCACCCTTTTTGCAGGAACTATACGTGACAACATTGTTTATGGGAAGAATGACGCTTCGGAGGATGAAATAAGCAGGGCAGCACGTCTTGCAAATGCTCATGCATTTATAAGTTCTATGAAAGATGGATATGACACATACTGTGGAGAAAGAGGAGTGCAGCTTTCAGGGGGGCAAAAGCAGAGGATAGCAATAGCTCGAGCAATACTAAAGAACCCATCATTCCTGCTCTTAGACGAGGCAACCAGTGCTCTAGATAGTGTATCAGAGAATCTAGTGCAGGAGACATTGGAGAAGATGATGATTGGAAGAACTTGTGTAGTTATAGCTCATCGTTTGTCAACAATACAGTGTGTAGATTCTGTCGCTGTCATTAAAAATGGGAAGGTAGTGGAACAAGGATCTCACTCAGAGTTATTGGCCTTGGGACAAAACGGGGCATACCACACTATGATTAGGCTACAACATGGTTACTTCAGCTGA 3747 0.4262 MGKKGGFLRYADGMDKLLLVFGALGCIGDGLQTSVTMLVLGSLIDDYADHTSASDNAAFNHTVDKYALRLLYIAIGVGLSAFIEGVCWTRTAERQTSRMRTAYLKSVLRQEVGFFDNQTDSTTFQVISTISSDAQIIQDTLAEKVPTCLVHLSSFFSSFIVALVLSWRLAVSAFPFSIIMITPTIIFGKDLKEFGKKMKDAYAVAGSIAEQAISSIRTVYSYVGEKQTLERFGSALETSMKLGIKIGLTKGVVIGSFGLMYATWAFQTWVGSVLVTDRGESGGNVFCAEICIIWAGLSLMSALPSLASLVEATTAASRIYQMIDRVPAINSENGEGKLLKDARGEITFKDVEFSYPSRPDTPILKGLNLKLRAGKTVGLVGGSGSGKSTIISLIERFYDPTNGKILLDGYDINTLHLKWLRSQMGLVNQEPILFATSIKDNILLGNPGASVEAVESAAMAANAHDFIVKLPRGYDTQVGQLGAQLSGGQKQRIAIARALIRNPRILLLDEATSALDSQSEKLVQETLDSACRGRTTIIVAHRLSTIRKADTIVVLQSGRVVESGSHDELIQLNNGQGGTYSKMLQLQQLAVQEERESKHCISASPRNVEIRRTAYSSWQSSPAAPFSPIYSISIAESPLVPSWDDDDYYNKNPNKSSDSGSTFSQWRLLRMNVPEWKHILLGCLGAVGSGICQPIYSYCLGIVASVYFIKDESRIKSEIRLYSIIFCTLAIVNMISGLIQQYNFAIMGERLLKRVRENLLAKVLTFEIGWFDQEDNTSAAICAKLATESNLVRSLVAERMSLLVQVFFMASLAFILGLVVSWRVAIVMIAMQPLIIACFYSKSILMKSMSGKAQKAHREGSQLAMEATINHRTITAFSSEKRILNLFKIAMKGPQKESIRQSWISGSIMSISQFLTTASITLTFWYGGRLLNQGLIESKNLLQVFLILMGTGRQIAETGSMTSDIAKSGGAIGSIFAILDRKSQIEPEDGATLKKSGKTIKGNIKLKDVFFSYPARPDQMILKGLSLEIEAGKTIALVGQSGSGKSTIIGLIERFYDPAKGSISIDNCDIKEFNVRKLRSQIALVSQEPTLFAGTIRDNIVYGKNDASEDEISRAARLANAHAFISSMKDGYDTYCGERGVQLSGGQKQRIAIARAILKNPSFLLLDEATSALDSVSENLVQETLEKMMIGRTCVVIAHRLSTIQCVDSVAVIKNGKVVEQGSHSELLALGQNGAYHTMIRLQHGYFS 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2663 1248 CDD ABC_MTABC3_MDL1_MDL2 346 587 - -
Bisa08g2663 1248 Coils Coil 1166 1186 - -
Bisa08g2663 1248 ProSitePatterns ABC transporters family signature. 1143 1157 IPR017871 GO:0005524|GO:0016887
Bisa08g2663 1248 Pfam ABC transporter 364 513 IPR003439 GO:0005524
Bisa08g2663 1248 CDD ABC_MTABC3_MDL1_MDL2 1004 1243 - -
Bisa08g2663 1248 FunFam ABC transporter B family member 19 336 588 - -
Bisa08g2663 1248 ProSitePatterns ABC transporters family signature. 485 499 IPR017871 GO:0005524|GO:0016887
Bisa08g2663 1248 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1004 1240 IPR003439 GO:0005524
Bisa08g2663 1248 CDD ABC_6TM_Pgp_ABCB1_D2_like 669 985 - -
Bisa08g2663 1248 FunFam ABC transporter B family member 4 994 1246 - -
Bisa08g2663 1248 SUPERFAMILY ABC transporter transmembrane region 667 986 IPR036640 GO:0005524|GO:0016020
Bisa08g2663 1248 Gene3D - 344 600 IPR027417 -
Bisa08g2663 1248 Pfam ABC transporter transmembrane region 680 948 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2663 1248 Pfam ABC transporter transmembrane region 30 281 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2663 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 337 587 IPR027417 -
Bisa08g2663 1248 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 319 - -
Bisa08g2663 1248 Gene3D - 994 1246 IPR027417 -
Bisa08g2663 1248 SMART AAA_5 1031 1217 IPR003593 GO:0016887
Bisa08g2663 1248 SMART AAA_5 373 559 IPR003593 GO:0016887
Bisa08g2663 1248 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 680 967 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2663 1248 Gene3D ABC transporter type 1, transmembrane domain 69 976 IPR036640 GO:0005524|GO:0016020
Bisa08g2663 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1243 IPR027417 -
Bisa08g2663 1248 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 346 582 IPR003439 GO:0005524
Bisa08g2663 1248 PANTHER ABC TRANSPORTER B FAMILY 8 735 IPR039421 -
Bisa08g2663 1248 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 20 311 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa08g2663 1248 Pfam ABC transporter 1022 1171 IPR003439 GO:0005524
Bisa08g2663 1248 SUPERFAMILY ABC transporter transmembrane region 7 327 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2663 Bisa-ChrBisa08 61789681 61794456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2663 20 589 Calmodulin-binding Proteins AT2G36910 35.345 7.71e-101 347