Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2648 ATGGGTCTCTCAAACATTCCCAATCTAGCAGAAGGCGTTATTCCCGTTCTCATCGTGAACACCCTACTCTCATTGGCCCTCTTCAAGAACATGCTGAGGTCGGTGCTGGAAGCAGTCGGAGTGACGTCATCATCGTCCTCGTCCTCGTATTCTCAGAACACGGAAGAAGAAGAGTGGGATGATTTGAGTTCGAGTTCGAGTTCGAGGAGGATGAGGAGGATGAGGAGGATCTCGGTAACACAGTACAAGTGTATGTCAGGGACAACAAATGACGCAAGTGGATCAGGAGGTGATAGCAGAGGATTGGGTGCGGTGGAGTGCTGCGTGTGTCTGTGCAGGTTCGAGGCGAATGAGGAGGTGAGTGAATTGGCCTGCAAGCATTTCTTCCACAGAGCTTGCCTAGACAAGTGGTTCGATAACAAACACACGACTTGCCCTCTCTGTCGTTCCATACACTAG 459 0.5076 MGLSNIPNLAEGVIPVLIVNTLLSLALFKNMLRSVLEAVGVTSSSSSSSYSQNTEEEEWDDLSSSSSSRRMRRMRRISVTQYKCMSGTTNDASGSGGDSRGLGAVECCVCLCRFEANEEVSELACKHFFHRACLDKWFDNKHTTCPLCRSIH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2648 152 SMART ring_2 107 148 IPR001841 -
Bisa08g2648 152 SMART ringv_2 106 149 IPR011016 GO:0008270
Bisa08g2648 152 SUPERFAMILY RING/U-box 106 151 - -
Bisa08g2648 152 MobiDBLite consensus disorder prediction 44 71 - -
Bisa08g2648 152 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 151 IPR013083 -
Bisa08g2648 152 Pfam Ring finger domain 106 149 IPR001841 -
Bisa08g2648 152 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Bisa08g2648 152 PANTHER - 1 151 IPR044249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2648 Bisa-ChrBisa08 61555200 61555658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2648 1 150 C3H Transcription Factor Family AT2G04240 34.395 1.41e-20 80.9