Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2641 ATGGAATCCATATGCATAGAGTGGTCCCACCCAGTGTTGCTACTGTTACTCATGAGTCTGCACCGTTGTATCCATGCACAGTCTGGCACATCATCCGTCCCTCCCTTAGGCCTGAGCCTACGAGACGACCTCAAGGCCTCCTTCAGCGTCACGGTGGTCGCTTGCCTATCTGCTTTCGTCTTCGTGGTCTTCTTCTCCCTCTACCTCCGTCACTGCGCCAACTCCTACGTCTCCACTCGCAATCCTATCGCTGCCGCCGCCGACCTCTTGCGCCGCCGCCTCCACCGTGAACTCATCAACAAATGTCCCATCCTCGTCTACTCCGCAGTGAAGGAACTCAAAATCGGCAAGTCCGCTCTGGAATGCGCCGTCTGCTTGGGGGAGTTTCAGGACAAGGACAAGATCCGCTTGGTGCCAAAATGTCATCACGTTTTTCATCCCGATTGCATCGATGCTTGGTTCGTTTCGCACCTCACTTGTCCTGTTTGTCGCGCAACGCTCACCTCCCCGGATTGCGACGACAACGCCGTCGTCGTTGTCCCGACGGAGTCGAATCCCTCTGCATCGGGTGACATCGAGCAGCAGAGCACCACGGAATGGCAGGTACCGCCGGAGCGAACGATTGGCGTCTGTGAAAGTGGAAGTGCTGATCACCGGACGCAGATTACGTCTCCGATCCAATCAAGAATGTTGGACAAGCTTCCGAGGTCGCACTCCACGGGACACTCTCTGTACATGGAACCTGGGGAGACGATGGATAGGTACACCTTGAGGTTGCCGGAGCATGTGAGAGAGAAGATTCTGGTGAATCAAAGCAGCATTCAGAGTTCGGCGAGCGGCGACGTCGTTTTGCCGGGAGTGTGGAGCTCGAAGAGAGGATGGAAGTACAGGAGTGAGTGGGAAGGAGGCGATGACAAGGAGAGGTTTGTGTTCTCCTGCATCACTCGGCCATTTGTTTCTGTTAAATCCGCGAAGGAGATTACTGAGAGTTCGTCGCATCAGCCTCCGGTTTGA 1014 0.5533 MESICIEWSHPVLLLLLMSLHRCIHAQSGTSSVPPLGLSLRDDLKASFSVTVVACLSAFVFVVFFSLYLRHCANSYVSTRNPIAAAADLLRRRLHRELINKCPILVYSAVKELKIGKSALECAVCLGEFQDKDKIRLVPKCHHVFHPDCIDAWFVSHLTCPVCRATLTSPDCDDNAVVVVPTESNPSASGDIEQQSTTEWQVPPERTIGVCESGSADHRTQITSPIQSRMLDKLPRSHSTGHSLYMEPGETMDRYTLRLPEHVREKILVNQSSIQSSASGDVVLPGVWSSKRGWKYRSEWEGGDDKERFVFSCITRPFVSVKSAKEITESSSHQPPV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2641 337 PANTHER RING FINGER DOMAIN-CONTAINING 42 172 - -
Bisa08g2641 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 170 IPR013083 -
Bisa08g2641 337 SUPERFAMILY RING/U-box 121 170 - -
Bisa08g2641 337 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
Bisa08g2641 337 SMART ring_2 122 163 IPR001841 -
Bisa08g2641 337 CDD RING-H2_EL5-like 121 164 - -
Bisa08g2641 337 FunFam E3 ubiquitin-protein ligase ATL6 83 170 - -
Bisa08g2641 337 Pfam Ring finger domain 121 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2641 Bisa-ChrBisa08 61457230 61458243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2641 11 293 Rapid Response to Elicitors AT3G05200 35.855 1.31e-48 166