Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2618 ATGGAGGAAGAACATGAGGTTTACGGAGGCGAGATGCCAGACGTGGGTGAGATGGAAGGAGACTTGGACGCTCATCACACCGACGTCGATATGTCTGCTGCTGACGACGATGCTGTCAAGGAACTCGACGAGATGAAGAAGAGATTGAAGGAAATGGAAGAAGAAGCCGCAGCTCTCCGTGATATGCAGGCCAAGGTCGAGAAGGAGATGGGTGCAGTTCAAGACCCTGCTAGTGCGGCTGCTTCTCAGGCAAGCAAGGAGGAGGCAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTCCAATCATGTGGTACAGTGAATAGGGTGACTATTCTGACAGACAAGTTTGGCCAGCCAAAAGGTTTTGCTTATGTGGAATTCCTTGAACATGAAGCTGTTCAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCGTGGTCGTCAACTGAAGGTTTTGCCCAAGAGGACCAATGTTCCTGGAATGAAACAATATCGCCCCAGGAGTTTCAATCCTTACATGGCTAATCGCTTCAGGAGGCCGTACCCGCCTCCTTACTTTTATTCTCCTTATGGATATGGGAAGGTTCCCAGGTTCAGGAGGCCAACTCGGTTCATGCCGAACTATTAG 663 0.4872 MEEEHEVYGGEMPDVGEMEGDLDAHHTDVDMSAADDDAVKELDEMKKRLKEMEEEAAALRDMQAKVEKEMGAVQDPASAAASQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEHEAVQEALVLNESELRGRQLKVLPKRTNVPGMKQYRPRSFNPYMANRFRRPYPPPYFYSPYGYGKVPRFRRPTRFMPNY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2618 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 92 168 IPR000504 GO:0003723
Bisa08g2618 220 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 28 175 - -
Bisa08g2618 220 Gene3D - 28 164 IPR012677 -
Bisa08g2618 220 FunFam Polyadenylate-binding protein 1 31 164 - -
Bisa08g2618 220 MobiDBLite consensus disorder prediction 1 34 - -
Bisa08g2618 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 94 162 IPR000504 GO:0003723
Bisa08g2618 220 CDD RRM_II_PABPs 93 164 - -
Bisa08g2618 220 SMART rrm1_1 93 164 IPR000504 GO:0003723
Bisa08g2618 220 SUPERFAMILY RNA-binding domain, RBD 82 186 IPR035979 GO:0003676
Bisa08g2618 220 Coils Coil 35 69 - -
Bisa08g2618 220 MobiDBLite consensus disorder prediction 8 34 - -
Bisa08g2618 220 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2618 Bisa-ChrBisa08 61057253 61061301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2618 89 139 Eukaryotic Initiation Factors Gene Family AT2G36660 39.216 1.85e-08 52.4