Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2611 ATGATTCACGTAGTCTCTTATGATATAAAGATACATTGGATGGCCATTACACCTTGTGGAAGTACATCTGTTGCACAATGGGGAGTTCGCCCTCAATTTTTCCTGAGATCTTGTACGGCTGGCAAGATTGCATCATCTGGGTACAATATCACAAGCAGGGTGAGTTTTATGGCTTCCCCGAGTTCAAGTTCATTTTCTCGGGATTCCTTGCATGCCCTATTTGATATGGGTACATCTCAAACATTGTATCGTCAAAGGGGATCAAGGTTGATAGTTAGAGCAGATGCAGATTACTATTCTGTCCTCGGGGTATCAAGAAATGCTAGTAAATCTGAAATTAAGAATGCTTATCGGAAACTTGCCCGGAATTGTCATCCAGATGTGAACAAAGAAGCTGGAGCAGAAGAGAAATTTAAGGAAATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAACGGTCCATATATGACAGATATGGAGAGGCTGGACTTAAAGGTTCTGGAATGGGCATGGGGGATTTCGGTAGTGCTTTTGAAAATATTTTTGAGACACTATTTGAGGGCATGAATGGTGGCATGAACAACAGAGGCTCTTGGAATGGAGCTGTTGATGGTGAAGATGAGTATTACAGTCTTGTCTTGAACTTTAAAGACGCAGTTTTTGGAGTAGAAAAAGAGATAGAGGTAAGCCGACTAGAGATTTGTGGAACTTGCAATGGTACGGGGGCTAAACCAGGGACTACACCATCCAAATGTAGTACCTGTGGAGGTCAAGGCCGTGTTGTCGCATCAACAAGGACGCCCTTGGGTATTTTCCAGCAGTCAATGACGTGCTCTTTATGTAATGGAACTGGAGAAATTTCGACTCCTTGCAACACATGTTCTGGTGAAAGTCGAGTGAGGAGAACAAAGCGGATCAGTCTAAAAGTCCCAGCCGGTGTGGACTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGTAATGCTGGAAAACGAGGTGGTGCCCCTGGTGACCTCTTTGTTGTCATTGAAGTCATGCCAGATCCTGTCCTTAAGCGTGATGACACCAACATTCTATACACTTGTAAGGTGTCTTATATTGATGCAATCTTGGGGACTACAATTAAGGTTCTTACTGTAGACGGCGAGGTGGATTTAAAGATCCCAGCTGGGACCCAACCCAACACAACACTTGTTATGGCAAAGAAAGGTGTTCCGTTTCTGAATAAAAGCAATATGAGGGGTGATCAGTTGGTTCGGGTGCAAATTGAAATACCTAAAAGACTTAACAGTGACGAGAAGAAGCTTATTGAGGAACTCGCTGATTTAAGCAAAGGCAAGACTGCGACCAGTACGAGATAA 1362 0.4347 MIHVVSYDIKIHWMAITPCGSTSVAQWGVRPQFFLRSCTAGKIASSGYNITSRVSFMASPSSSSFSRDSLHALFDMGTSQTLYRQRGSRLIVRADADYYSVLGVSRNASKSEIKNAYRKLARNCHPDVNKEAGAEEKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFGSAFENIFETLFEGMNGGMNNRGSWNGAVDGEDEYYSLVLNFKDAVFGVEKEIEVSRLEICGTCNGTGAKPGTTPSKCSTCGGQGRVVASTRTPLGIFQQSMTCSLCNGTGEISTPCNTCSGESRVRRTKRISLKVPAGVDSGSRLRVRNEGNAGKRGGAPGDLFVVIEVMPDPVLKRDDTNILYTCKVSYIDAILGTTIKVLTVDGEVDLKIPAGTQPNTTLVMAKKGVPFLNKSNMRGDQLVRVQIEIPKRLNSDEKKLIEELADLSKGKTATSTR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2611 453 CDD DnaJ 97 150 IPR001623 -
Bisa08g2611 453 ProSiteProfiles Zinc finger CR-type profile. 223 304 IPR001305 GO:0031072|GO:0051082
Bisa08g2611 453 Pfam DnaJ central domain 236 298 IPR001305 GO:0031072|GO:0051082
Bisa08g2611 453 ProSitePatterns Nt-dnaJ domain signature. 138 157 IPR018253 -
Bisa08g2611 453 CDD DnaJ_zf 236 298 IPR001305 GO:0031072|GO:0051082
Bisa08g2611 453 NCBIfam molecular chaperone DnaJ 97 442 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa08g2611 453 ProSiteProfiles dnaJ domain profile. 97 161 IPR001623 -
Bisa08g2611 453 Gene3D DnaJ domain 94 199 IPR036869 -
Bisa08g2611 453 SUPERFAMILY HSP40/DnaJ peptide-binding domain 351 437 IPR008971 GO:0006457|GO:0051082
Bisa08g2611 453 Pfam DnaJ C terminal domain 211 426 IPR002939 -
Bisa08g2611 453 FunFam Molecular chaperone DnaJ 228 304 - -
Bisa08g2611 453 Hamap Chaperone protein DnaJ [dnaJ]. 94 449 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa08g2611 453 PRINTS DnaJ domain signature 133 153 IPR001623 -
Bisa08g2611 453 PRINTS DnaJ domain signature 153 172 IPR001623 -
Bisa08g2611 453 PRINTS DnaJ domain signature 117 132 IPR001623 -
Bisa08g2611 453 PRINTS DnaJ domain signature 99 117 IPR001623 -
Bisa08g2611 453 SUPERFAMILY Chaperone J-domain 94 195 IPR036869 -
Bisa08g2611 453 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 223 302 IPR036410 -
Bisa08g2611 453 Gene3D - 346 453 - -
Bisa08g2611 453 SUPERFAMILY HSP40/DnaJ peptide-binding domain 204 358 IPR008971 GO:0006457|GO:0051082
Bisa08g2611 453 CDD DnaJ_C 207 429 - -
Bisa08g2611 453 SMART dnaj_3 96 153 IPR001623 -
Bisa08g2611 453 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 55 452 - -
Bisa08g2611 453 FunFam Chaperone protein dnaJ A6 chloroplastic 94 199 - -
Bisa08g2611 453 FunFam Chaperone protein dnaJ 1, mitochondrial 346 453 - -
Bisa08g2611 453 Gene3D - 206 341 - -
Bisa08g2611 453 Pfam DnaJ domain 97 158 IPR001623 -
Bisa08g2611 453 Gene3D - 236 299 - -
Bisa08g2611 453 FunFam Putative Mitochondrial DnaJ chaperone 289 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2611 Bisa-ChrBisa08 60918400 60928115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2611 98 160 C2H2 Transcription Factor Family AT1G74250 44.928 1.73e-09 58.2