Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2601 ATGGGAAGATCTCCTTGCTGTGACGATAGTGGCTTGAAGAAAGGCCCTTGGACCCCTGAAGAAGATCAGAAGCTCGTTAACTTCATCCACAAGCATGGCCATGGCAGCTGGAGAGCCCTCCCTAAACTCGCAGGGTTGAATAGATGCGGGAAAAGTTGCAGATTAAGGTGGACCAACTATTTGAGGCCAGACATAAAGAGAGGGAAATTTTCCCAAGAAGAAGAGCAGACAATTCTGAATCTCCATGCCGTGCTGGGCAACAAATGGTCAGCGATTGCGAGCCACTTGCCAGGCAGGACTGATAATGAGATAAAGAATTTCTGGAACACCCATCTGAAGAAGAAGCTGATTCAAATGGGGTATGACCCTATGACCCACCAGCCTCGAACTGATATCTTCTCGAGCTTGCCTCATCTCATAGCTCTCGCCACTCTCAAACAACTTCTGGACACTAATATTAATAATTCTTCTTCTGAGCCACTCCAAGTTCAACTGGCCAGGCTTCAGTGCCTTCAACAAAACCTCCTTCAATCTCAGCCTCAGCCTCAACCTCAGCTTCAGGCTTATTGTTCGAGTACTGATTTATCTCATCACACAAACACTATTCTAAACAGTGCAAATCCATCTCTTGATCAGATTCAGACCCTCAATATCAATATGCCTGATTTAATAACGCCTTCTTCTTCTTCTTGTTCTTTTACATATCATCAATTACCGCCATTGATAGAAACTACTAGTTCTCCAAATTCTCCCTGGCTTCTATCATCTTCATCAACCACTACTCCATCTCCTTCTTCTGTGGCTGCAGCTACACATACTTCAGTGACTAATAGGGAATTGGGTCAATCCATTTGGTCTGAGCTGCTCCTGGATGACCCTTTGTTCCATGAGATTGCCTAG 900 0.4489 MGRSPCCDDSGLKKGPWTPEEDQKLVNFIHKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILNLHAVLGNKWSAIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDIFSSLPHLIALATLKQLLDTNINNSSSEPLQVQLARLQCLQQNLLQSQPQPQPQLQAYCSSTDLSHHTNTILNSANPSLDQIQTLNINMPDLITPSSSSCSFTYHQLPPLIETTSSPNSPWLLSSSSTTTPSPSSVAAATHTSVTNRELGQSIWSELLLDDPLFHEIA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2601 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa08g2601 299 CDD SANT 69 112 IPR001005 -
Bisa08g2601 299 FunFam MYB-related transcription factor 13 66 - -
Bisa08g2601 299 CDD SANT 16 61 IPR001005 -
Bisa08g2601 299 MobiDBLite consensus disorder prediction 249 268 - -
Bisa08g2601 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa08g2601 299 Gene3D - 11 67 - -
Bisa08g2601 299 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa08g2601 299 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa08g2601 299 FunFam Transcription factor MYB39 69 130 - -
Bisa08g2601 299 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa08g2601 299 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa08g2601 299 Gene3D - 69 116 - -
Bisa08g2601 299 SMART sant 13 63 IPR001005 -
Bisa08g2601 299 SMART sant 66 114 IPR001005 -
Bisa08g2601 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 243 - -
Bisa08g2601 299 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2601 Bisa-ChrBisa08 60733485 60734687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2601 1 219 MYB Transcription Factor Family AT1G34670 65.939 2.59e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa08g2601 Myb_DNA-binding 2.1e-17 CL0123