Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2599 ATGCTCTACTTCTGCCACATCTGTAAGAGGGGCCGCATTCATGCAGAAGGGCAAGTATTTTGGGTTTTAATCCCCCATGATTCTCGCCACACTGAGCTTCGCGCTGGTGGTTCTGCCGCCGCTGATGATTTTCATGGTTATCCTTAGTTGAATCAGATAAAGATCTTAGTTTCGGTGATCGGTGACAAGCTGATGGGTGCTGCGGGCTCCAAGCTCGAGAAAGCTCTTGGCGACCAATTTCCTGAAGGCGAGCGGTACTTTGGTCTAGAGAACTTTGGTAACACTTGTTACTGCAACAGCGTTTTGCAGGCACTATACTTTTGTGTTCCATTTCGGGAACAATTGCTAGAGTATTATGGAAATAACAAAACGATAGGGGATGCAGAAGAAAACCTTTTAACTTGCTTAGCAGACTTATTTTCACAGATAACTTCCCAGAAGAAGAAAACTGGTGTCATTGCTCCCAAGCGATTTGTGCAGAGGTTGAAAAAACAGAATGAACTCTTCCGTAGCTATATGCATCAGGATGCCCACGAGTTCTTGAACTTTTTGTTAAATGAACTTGTGGACATTTTGGAGAAAGAGGCCCAGGCTATTAAGAATGACCAAGGGACCTCTCCGCATTCTGATACTGCGAATGGACCTAAGAATGGTTTAGCCAATGGTGCTAAAAAAGAGCCTTTAGTTACATGGGTGCACAAAAATTTTCAGGGAATACTCACCAATGAGACAAGGTGCTTGCAGTGTGAAACAGTGACAGATAGGGATGAAACGTTTTTTGACTTGAGCCTTGATATTGAGCAGAACAGTTCAATCACAAGCTGTTTGAAAAACTTCAGTTCCACTGAGACACTAAATGCTGAAGACAAATTTTTTTGTGACAAGTGCTGCAGTTTACAAGAAGCTCAGAAAAGGATGAAGATAAAGAAACCTCCTCATATCTTGGTCATCCATCTTAAGCGTTTTAAGTACATTGAACAGTTGGGCCGATATAAGAAGCTGTCTTACCGGGTTGTTTTCCCTCTTGAACTGAAGTTGAGTAACACTGTTGAAGATGCAGATATTGAGTATTCCCTGTTTGCAGTAGTTGTCCATGTTGGGAGTGGGCCCAACCACGGACATTACGTCAGCCTTGTGAAAAGCCATAACCACTGGTTATTTTTTGATGATGAAAATGTTGAGATGATTGATGAGTCGGTTGTGCAGACATTTTTTGGTTCAGCACAGGAATATTCCAGTAATACAGACCATGGGTACATTTTGTTCTATGAGAGCCTTGGGTCTGGAAACAGAAACTAG 1299 0.4249 MLYFCHICKRGRIHAEGQVFWVLIPHDSRHTELRAGGSAAADDFHGYPXLNQIKILVSVIGDKLMGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKTIGDAEENLLTCLADLFSQITSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAIKNDQGTSPHSDTANGPKNGLANGAKKEPLVTWVHKNFQGILTNETRCLQCETVTDRDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESLGSGNRN 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2599 432 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 357 375 IPR018200 GO:0004843|GO:0006511
Bisa08g2599 432 MobiDBLite consensus disorder prediction 199 216 - -
Bisa08g2599 432 Pfam Ubiquitin carboxyl-terminal hydrolase 87 423 IPR001394 GO:0004843|GO:0016579
Bisa08g2599 432 FunFam Ubiquitin carboxyl-terminal hydrolase 3 69 425 - -
Bisa08g2599 432 Gene3D Cysteine proteinases 68 425 - -
Bisa08g2599 432 MobiDBLite consensus disorder prediction 199 222 - -
Bisa08g2599 432 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 66 425 - -
Bisa08g2599 432 SUPERFAMILY Cysteine proteinases 85 424 IPR038765 -
Bisa08g2599 432 CDD Peptidase_C19G 88 424 - -
Bisa08g2599 432 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 88 103 IPR018200 GO:0004843|GO:0006511
Bisa08g2599 432 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 87 426 IPR028889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2599 Bisa-ChrBisa08 60680335 60687077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2599 88 397 Miscellaneous Gene Families AT4G31670 26.814 2.06e-29 119