Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2579 ATGACGCAGCAGAATGTGGTAGTGCCCGATGCAAAACCCAGAATCAACTTGGCCTTCACTGTCGCAGTATCCAACTCTTCCATCTTCACCACCACAGCGCAGAAGCCCCCCACCCCACCCGGAGGCTGCATCACCATTTCAAGGAAGAAGTTCTTGAAGAACCTTGAGATCAATGGAGGAGCTCGAATTAACGCCTGGGTTGACTCTATGAGAGCCTCCTCTCCTACCCATGTCCACACTATTACCACCACTCCTTCTCTGGGCGAAGAACAGAGCTCCTGGATTGTTCACCACCCGTCAGCATTAGACACGTTCGACCATATCATGGATGCCTCCAAAGGGAAGCAAATTGTTGTGTTTCTGGACTACGACGGCACGCTCTCGCCTATCGTCGACGACCCTGATCGTGCTTTCATGTCCGACGCGATGAGGAAGACGGTGAGGAATCTGGCTAGGTGTTTTCCCACTGCAATAGTCACTGGGAGATGCAGAGACAAGGTGTACAACTTCGTTCGCTTGGCAGAGCTGTATTATGCAGGAAGTCATGGGATGGACATTAAAGGCCCGACTAAAATTTCTAAATACAATAAAGACAGCAAAGCAGTTCTATTTCAGCCTGCGTGTGAATTTCTACCCATGATAGATGAGGTGTATCAAAAGTTAGTGGAGAAAACAAGTTCTACTCCTGGGGCAAAGGTGGAGAACAACAAGTTCTGCGCCTCTGTTCATTTTCGCTGCGTTGACGAAAAGAAATGGAGCGAACTGGCACACCAAGTTAGATCAGTGTTAAAGCAGTATCCCAAGCTCCATCTTACACAAGGAAGGAAGGTACTGGAGATTCGCCCCCCGATTAAATGGGACAAAGGGGAAGCTCTGGAATTTTTGTTAGAATCACTAGGATTCGCCAACTGTGCCGATGTGTTTCCTCTTTACATTGGCGACGACCGATCCGATGAAGATGCATTCAAGAAACTGAGAGAGAGAGGACAAGGCTACGGCATTCTTGTCTCCAAATTTCCAAAGGACACGAGTGCCTCCTACTGCTTACAAGAACCCGACGAGGTTATGGAGTTTCTAGGACGATTAGTGGAGTGGAAGAGAGTGAGGTTGGGAGCACGATCCAGGGTGTAA 1131 0.4872 MTQQNVVVPDAKPRINLAFTVAVSNSSIFTTTAQKPPTPPGGCITISRKKFLKNLEINGGARINAWVDSMRASSPTHVHTITTTPSLGEEQSSWIVHHPSALDTFDHIMDASKGKQIVVFLDYDGTLSPIVDDPDRAFMSDAMRKTVRNLARCFPTAIVTGRCRDKVYNFVRLAELYYAGSHGMDIKGPTKISKYNKDSKAVLFQPACEFLPMIDEVYQKLVEKTSSTPGAKVENNKFCASVHFRCVDEKKWSELAHQVRSVLKQYPKLHLTQGRKVLEIRPPIKWDKGEALEFLLESLGFANCADVFPLYIGDDRSDEDAFKKLRERGQGYGILVSKFPKDTSASYCLQEPDEVMEFLGRLVEWKRVRLGARSRV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2579 376 FunFam Trehalose 6-phosphate phosphatase 213 372 - -
Bisa08g2579 376 NCBIfam HAD-IIB family hydrolase 119 327 IPR006379 -
Bisa08g2579 376 Gene3D - 117 202 IPR023214 -
Bisa08g2579 376 Gene3D - 218 372 IPR023214 -
Bisa08g2579 376 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 369 IPR044651 GO:0004805|GO:0005992
Bisa08g2579 376 CDD HAD_TPP 118 357 - -
Bisa08g2579 376 FunFam Trehalose 6-phosphate phosphatase 207 283 - -
Bisa08g2579 376 NCBIfam trehalose-phosphatase 115 363 IPR003337 GO:0003824|GO:0005992
Bisa08g2579 376 Pfam Trehalose-phosphatase 120 352 IPR003337 GO:0003824|GO:0005992
Bisa08g2579 376 FunFam Trehalose 6-phosphate phosphatase 117 203 - -
Bisa08g2579 376 SUPERFAMILY HAD-like 118 366 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2579 Bisa-ChrBisa08 60384392 60386769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2579 113 325 Trehalose Biosynthesis Gene Families AT1G70290 28.571 6.58e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2579 08 60384392 60386769 Bisa08g2579 08 60384392 60386769 ECH