Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2577 ATGGCAGCAACTATAGACATGTATAGTAGCAACATCATGACACCCAGTATCATAGATCCATGCAGTGAAGAGTTGATGAAAGCACTTGAACCTTTTATGAAAAGTGACTCGTCTTCCTCCACCTCCTTCCATTCTCCTCCTCCTTCTATGTCTTCCTCCTCTTACTCTTCAGCTTCTCCTTCTCTGCTGAATTTCTCGAGCCAGGAGCAAAAGGGTCTGGGCCACACCAGTTCCATAGGCCTTAACCAGCTCACCCACTCTCAAATCCTTCAAATTCAAGCCCAAATCCACACCCAGCAGCAGCAGAAGCAACAGCACATGGCTTCCGTAGCCGCAGCTTCACTGCTACGCCGTCGTTTAACCCTCAGCTCAAAACCCGTCCCCATGAAGCAATTCGGGGGTGCTGCAAAGCCAACCAAGCTGTACCGTGGAGTGAGACAGCGACATTGGGGTAAGTGGGTCGCGGAGATCCGACTACCCAAGAACCGAACCCGACTCTGGCTCGGGACCTTCGATACCGCCGAAGAGGCTGCCTTGGCCTACGACAACGCAGCGTATAAGCTAAGAGGAGAATTCGCGAGACTCAATTTTCCTCATCTGAAGCACCAAGGAGCTCACGTGTTGGGCGAATTCGGCGATTACAAGCCTCTTCATTCCTCCGTGGACGCCAAGCTTCAAGCTATCTGTGAAAGCTTAGCAGCAACAGCGAATTCCCAGAAACAGGGCAACACACAGATGCCCTCTGCCTCTGCTTTCATCCACACAAAGCCTAACATCCAGCACTTCAATAATAACGCTAATGCAGAGAACTCAACCTCGTCTCCTTTGTCTGATGAATCCTCCGCTGCTTCGTCTTCTCCTAAATCAGACATTACTTATCTGGATTTCACGAGGGATGGAGCAGAGAACCTTGCCTTGCACAAGTTGAGTAGTATGTGGTATCTGTGGTGTTTACGGGTCTTAGGCAGCATCTGCTATGGAGTTTTTGACATTCGCAGAGGGTTTGTCGAGACGATGAATAGGGAATGA 1029 0.4995 MAATIDMYSSNIMTPSIIDPCSEELMKALEPFMKSDSSSSTSFHSPPPSMSSSSYSSASPSLLNFSSQEQKGLGHTSSIGLNQLTHSQILQIQAQIHTQQQQKQQHMASVAAASLLRRRLTLSSKPVPMKQFGGAAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGEFARLNFPHLKHQGAHVLGEFGDYKPLHSSVDAKLQAICESLAATANSQKQGNTQMPSASAFIHTKPNIQHFNNNANAENSTSSPLSDESSAASSSPKSDITYLDFTRDGAENLALHKLSSMWYLWCLRVLGSICYGVFDIRRGFVETMNRE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2577 342 PRINTS Ethylene responsive element binding protein signature 164 180 IPR001471 GO:0003700|GO:0006355
Bisa08g2577 342 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Bisa08g2577 342 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 313 - -
Bisa08g2577 342 SUPERFAMILY DNA-binding domain 141 199 IPR016177 GO:0003677
Bisa08g2577 342 FunFam Ethylene-responsive transcription factor 2 140 199 - -
Bisa08g2577 342 ProSiteProfiles AP2/ERF domain profile. 141 198 IPR001471 GO:0003700|GO:0006355
Bisa08g2577 342 MobiDBLite consensus disorder prediction 33 57 - -
Bisa08g2577 342 MobiDBLite consensus disorder prediction 263 289 - -
Bisa08g2577 342 Pfam AP2 domain 142 191 IPR001471 GO:0003700|GO:0006355
Bisa08g2577 342 Gene3D AP2/ERF domain 141 199 IPR036955 GO:0003700|GO:0006355
Bisa08g2577 342 CDD AP2 140 200 IPR001471 GO:0003700|GO:0006355
Bisa08g2577 342 SMART rav1_2 141 204 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2577 Bisa-ChrBisa08 60340361 60341479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2577 3 316 AP2-EREBP Transcription Factor Family AT4G39780 44.237 2.39e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa08g2577 AP2 5.3e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2577 08 60340361 60341479 Bisa08g2577 08 60340361 60341479 ECH