Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2570 ATGTCACTGCAAGTGAATTCTAATATAGCAACAATGGTTCATTCTGGATATGCTAAGAGGAGAAGCATGTCATGCAAAGCACATAACAAGGAAGAGGTGAGCATGAAGAAGAAGACGACGAACTTTTACGAAGTACTGTGTCTTGAATCTGAGAAGGTAGAGATTGGAGAGATAAGGAAGGCTTATAGAAGGATGGCTCTTCGATATCATCCTGATGTTTGCGTTGATCCTTCTGCCAAACGAGAGTCAACCACACGATTCATTGAGCTTCGAAAGGCCTATGACACACTCTGTGATCCAGTTTCCAGAAGATTGCACGATTATGAGTTGGGATTCATGGATTCCATTCAGTCCAAGTTTCCCAAACATGTGTGGCAAACCCAACTCTGTGGACTCCAACAAAGGTGCAACCTTCGCATGCAGAGGAGAAACAGAAACTCTCATTTCACTCACTGA 456 0.432 MSLQVNSNIATMVHSGYAKRRSMSCKAHNKEEVSMKKKTTNFYEVLCLESEKVEIGEIRKAYRRMALRYHPDVCVDPSAKRESTTRFIELRKAYDTLCDPVSRRLHDYELGFMDSIQSKFPKHVWQTQLCGLQQRCNLRMQRRNRNSHFTH 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2570 151 CDD DnaJ 41 99 IPR001623 -
Bisa08g2570 151 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 19 146 - -
Bisa08g2570 151 SUPERFAMILY Chaperone J-domain 14 105 IPR036869 -
Bisa08g2570 151 PRINTS DnaJ domain signature 82 102 IPR001623 -
Bisa08g2570 151 PRINTS DnaJ domain signature 62 77 IPR001623 -
Bisa08g2570 151 ProSiteProfiles dnaJ domain profile. 41 110 IPR001623 -
Bisa08g2570 151 SMART dnaj_3 40 102 IPR001623 -
Bisa08g2570 151 Pfam DnaJ domain 41 107 IPR001623 -
Bisa08g2570 151 Gene3D DnaJ domain 26 128 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2570 Bisa-ChrBisa08 60221469 60221924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2570 43 107 C2H2 Transcription Factor Family AT1G74250 41.791 1.66e-08 50.4