Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2554 ATGAATTCTCCATCCACACAGTTTGTTTCCTCAAGAAGGATGGGTGTGTATGATCCAATCCAGCAAATTAATATGTGGGGAGAAAATTTCAAAAGTAATGGTAATTTAAGTGCATTAATTGGCGAGGTAGAGGTGAATTTAGATACTCAGCCAGAGGATGCTTCTCATGGAACTCTGGGTACGTCTAAGATGTATGTCCAAGATACTAATAAACCTATTGAAAAGATACAAAGGCGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTACGGAAAAAGGCATATGTACAGCAATTAGAATCAAGTCGTTTGAAGCTGATCCAGTTAGAACAAGAGCTCCACCATGCAAGACAACAAGGCTTATATATGAGTGGTGGATTGGATTCTAATAATCTCAGTTTTGCTGGAACTGTAAATTCAGGTATTACAACTTTTGAAATAGACTATGGACACTGGGTAGAAGAGCAAAATAGACAAATCTGTGAACTGAGAGGTGCTCTCAATGCTCATATTGGTGACATGGAGCTCGAGATACTTGTAGATAATATAATGAATCACTATTTTGAACTTTTTCGCATGAAATCTGCTGCTGCAAAAGTAGATGTTTTTTATGTTATGTTTGGTATGTGGGAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGTTTTCGCCCTTCTGAGCTTCTGAAGGTTATCGTCCCTCTAATTGAACCCTTGACAGATCAACAACGGTTGGAGGCGTCTAACCTTGGACAATCTTGTCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGATAAACTTCATCATACACTTGCTGACACTGTAGCAGCCGGACAACTAGTTGAAGGAACTTATATTCCTCAGATGGCTACTGCAATGGAGAAAATGGAAGCTCTGGTGAGCTTTGTAAACCAGGCTGACCATCTTCGGCAAGAAACTTTGCAGCAAATGTTTCGGATCCTTACAACCCGTCAGGCTGCTCGATACCTGCTTGTTCTCGGAGAATATTTCCAACGCCTGCGAGCCTTGAGCTCACTCTGGGCAAACCGTCGTCGCGAACCAGCTTAG 1080 0.4204 MNSPSTQFVSSRRMGVYDPIQQINMWGENFKSNGNLSALIGEVEVNLDTQPEDASHGTLGTSKMYVQDTNKPIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIQLEQELHHARQQGLYMSGGLDSNNLSFAGTVNSGITTFEIDYGHWVEEQNRQICELRGALNAHIGDMELEILVDNIMNHYFELFRMKSAAAKVDVFYVMFGMWETTAERFFLWIGGFRPSELLKVIVPLIEPLTDQQRLEASNLGQSCQQAEDALSQGMDKLHHTLADTVAAGQLVEGTYIPQMATAMEKMEALVSFVNQADHLRQETLQQMFRILTTRQAARYLLVLGEYFQRLRALSSLWANRRREPA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2554 359 CDD bZIP_HBP1b-like 75 127 - -
Bisa08g2554 359 FunFam BZIP family transcription factor 74 123 - -
Bisa08g2554 359 Pfam bZIP transcription factor 75 104 IPR004827 GO:0003700|GO:0006355
Bisa08g2554 359 Pfam Seed dormancy control 161 236 IPR025422 GO:0006351|GO:0043565
Bisa08g2554 359 Coils Coil 94 121 - -
Bisa08g2554 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Bisa08g2554 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 115 IPR004827 GO:0003700|GO:0006355
Bisa08g2554 359 ProSiteProfiles DOG1 domain profile. 144 354 IPR025422 GO:0006351|GO:0043565
Bisa08g2554 359 SUPERFAMILY Leucine zipper domain 75 117 IPR046347 GO:0003700|GO:0006355
Bisa08g2554 359 Gene3D - 73 124 - -
Bisa08g2554 359 PANTHER TRANSCRIPTION FACTOR TGA9 1 357 - -
Bisa08g2554 359 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2554 Bisa-ChrBisa08 59937957 59942614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2554 1 358 Calmodulin-binding Proteins AT5G65210 68.937 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa08g2554 DOG1 1.1e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2554 08 59937957 59942614 Bisa08g2554 08 59937957 59942614 CCT
Bisa08g2554 08 59937957 59942614 Bisa08g2554 08 59937957 59942614 ECH