Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2532 ATGGACTTGACCGCGAAGCTTCATCACCTCGAGCTCAGTTCAAGCTTCCTCACCGGCACACTCATTTTGGACGCGCGGAAAGCCGCTATACGACCGTGCGCTTGGCCAGTTTCAAATCGCACTGTTTCTCAAACCCTTAGAGGTAATAATACTAATTTAATTAGGAACACTCAAGTTATTGGCCCAAGAAGAGCGAGTTTTAGTATCGCTGCTAGTTCGTCTGCCGTTGCCGTCGAGAAATCGGCGGAAGAAACCACGACGAAAGAGGATATCGAGTCTTTGTTTTCGGACACTTCCGTCGATGAGTTTGAAAATAAGCGTGTGAATAAGCAATCAAATACCGGGGCTTCGACTATTTCATCCGGTGTCAGGTTAGAAAATGTGACCAAAAGCTATAAGGGTGTCACAGTGTTGAAAGATATTAATTGGGAAGTGAAAAAGGGTGAAAAAGTGGGATTGGTTGGTGTTAATGGTGCAGGGAAGACGACGCAGATGAGAATTATTGCTGGTCAGGAGGAGCCAGACTCAGGGAATGTGATAAAAGCCAAACCGAATATGAAAATCGCATTTCTGAGTCAAGAATTTGAGGTATCTCTGAGTAGGACAGTGAGGGAGGAATTTCTGAGTGCGTTCAAAGAGGAAATGGAGATATCAGGGAAGTTGGAGAAGGTGCAGAAGGCACTAGAAGGTACTGTGAATGATTTAGAATTGATGGGAAGGCTTTTAGACGAGTTTGATTTGCTTCAGAGGAAAGCCCAGGCAGTAAACTTGGATGTAGTAGATGCAAAGGTAAGTAAATTGATGCCAGAACTTGGGTTTGCTCCTGAGGATTCAGACAGGTTGGTGGCGTCGTTCAGCAGTGGGTGGCAGATGAGGATGTCTCTTGGGAAGATTTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCCACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGGCTATCTTAACAAGCAGGATGTGCCAATGGTTATCATTTCCCATGACAGAGCTTTTCTTGACCAGCTGTGTACAAAAATTGTGGAGACTGACATGGGTGTATCCAGGACATATGAAGGCAATTATTCCCAGTATGTAGTTTCAAAGGCAGCATGGATTGAAGCACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAAAGACTTGATAAACAGGTTAGGGGCTGGAGTGAATTCTGGCCGTGCTTCATCTGCTGAGAAGAAGCTGGAGAAACTTCAGGAAGAGGAACTAGTAGAGAAGCCATTTCAACGTAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGGAGTGGAAGATCCATTGTGACTATTAAGAACCTGGAATTTGGCTTTGAGGATGAGGTGCTTTTCAACAAGGCAAATCTTACTATTGAAAGAGGAGAAAAAATTGCCATTATTGGCCCGAATGGGTGTGGCAAGAGTACTTTGCTGAAACTGATAATGGGTTTAGAGAAGCCAAATAGGGGTGAGATTGTGCTTGGGGAGCATAATGTATTACCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATCTGAACAAGACAGTGCTTGAGACAGTAGAAGAAGCTGCTGAGGACTGGAGGACTGATGATATTAAAGGACTTCTCGGGCGTTGTAATTTCAAGTCTGATATGCTTGATCGGAAAGTTTCTCTATTGAGTGGTGGCGAGAAGGCACGGCTGGCTTTTTGCAAATTTATGGTAAAACCATCCACTATGCTTGTTTTGGATGAACCGACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAACCGAGTACAAGGGCACTATTATTACAGTGTCACATGATCGATACTTTATAAAGCAAATAGTCAATAGAGTGATTGAAGTTAAAGATGGAGCTTTACAAGATTATGCAGGCGACTACAATTATTATTTAGAGAAGAATCTTGATGCTAGGGCCAGGGAGCTCGAACGTGAAGCAGAGCTTGAGGAGAAAGCTCCAAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCACGGAAGAAACAAAAGATGCAGGCTTTTCAGGCAGCAAAGCAGAAGTCCAAAGGTTCAAAAAATTCAAAGAGATGGAACTGA 2154 0.4341 MDLTAKLHHLELSSSFLTGTLILDARKAAIRPCAWPVSNRTVSQTLRGNNTNLIRNTQVIGPRRASFSIAASSSAVAVEKSAEETTTKEDIESLFSDTSVDEFENKRVNKQSNTGASTISSGVRLENVTKSYKGVTVLKDINWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSLSRTVREEFLSAFKEEMEISGKLEKVQKALEGTVNDLELMGRLLDEFDLLQRKAQAVNLDVVDAKVSKLMPELGFAPEDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYVVSKAAWIEAQYAAWEKQQKEIEQTKDLINRLGAGVNSGRASSAEKKLEKLQEEELVEKPFQRKQMKIRFPERGRSGRSIVTIKNLEFGFEDEVLFNKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPNRGEIVLGEHNVLPNYFEQNQAEALDLNKTVLETVEEAAEDWRTDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTMLVLDEPTNHLDIPSKEMLEEAITEYKGTIITVSHDRYFIKQIVNRVIEVKDGALQDYAGDYNYYLEKNLDARARELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGSKNSKRWN 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2532 717 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 122 708 - -
Bisa08g2532 717 Gene3D - 119 403 IPR027417 -
Bisa08g2532 717 ProSitePatterns ABC transporters family signature. 569 583 IPR017871 GO:0005524|GO:0016887
Bisa08g2532 717 FunFam ABC transporter ATP-binding protein 410 679 - -
Bisa08g2532 717 MobiDBLite consensus disorder prediction 669 717 - -
Bisa08g2532 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 366 IPR027417 -
Bisa08g2532 717 SMART AAA_5 474 642 IPR003593 GO:0016887
Bisa08g2532 717 SMART AAA_5 147 357 IPR003593 GO:0016887
Bisa08g2532 717 MobiDBLite consensus disorder prediction 669 697 - -
Bisa08g2532 717 Pfam ABC transporter 138 313 IPR003439 GO:0005524
Bisa08g2532 717 FunFam Putative ABC transporter ATP-binding component 124 408 - -
Bisa08g2532 717 Coils Coil 677 706 - -
Bisa08g2532 717 CDD ABCF_EF-3 450 641 - -
Bisa08g2532 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 450 665 IPR003439 GO:0005524
Bisa08g2532 717 CDD ABCF_EF-3 123 353 - -
Bisa08g2532 717 Pfam ABC transporter 466 597 IPR003439 GO:0005524
Bisa08g2532 717 Gene3D - 412 681 IPR027417 -
Bisa08g2532 717 Coils Coil 655 675 - -
Bisa08g2532 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 123 381 IPR003439 GO:0005524
Bisa08g2532 717 Pfam ABC transporter 352 439 IPR032781 -
Bisa08g2532 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 430 657 IPR027417 -
Bisa08g2532 717 ProSitePatterns ABC transporters family signature. 285 299 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2532 Bisa-ChrBisa08 59563583 59569615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2532 447 667 Calmodulin-binding Proteins AT2G36910 25.101 3.35e-12 68.2