Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2528 ATGCGGAAGGATGCCGCCGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATATGTCGGATCCCATAATCGAAAACAGAGAATCTTGAAGACTATTCGAAATTCAGAAGAACTACGGGAATGGGCCATTGAACAGCTGGAAAAAGCTCGGGCCCGGTTAAGGAAAGTAGAAATGGAAGCAGATCGTTTGATGATACAAGAGGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCCTGGCTAAACCTATTGATGGTCAAGGAGAAATTTCAGCTTCTGAATCTCGGTTAATTGAATCTCCCGCTCCCGATATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATTCGATGATCCCTATAGGGCATGCTATTGGTCAAAAAGCATCTTCTGTGGCTCAAGTGGTGACTATTTTACAAGAAAGGGGAGCAATGGAATACACTATTGTAGTAGCTGAAACAGCAGATTCTCCAGCTACATTACAATACCTCGCTCCTTATACAGGAGCAGCTCTGGCTGAATATTTTATGTACCGTGAACGACACACTTTAATCATTTATGACGATCCCTCCAAACAAGCACAGGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCATCGGGTCGCGAAGCTTATCTGGGAGATGTTTTTTATTTGCATTCACGCTTTTTGGAAAGAGCCGCTAAATCAAGTTCTCAGTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATTTGCCGATCTATTCAATGCTGGAATCAGACCTGCGATTAATGTGGGTATTTCCGTTTCCAGAGTTGGATCCGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTAGAATTGGCACAATTCACAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGACAAAGCTACTCAAAATCAATTGGCAAGAGGTCAACGATTGCGCGAGTTGCTCAAACAATCCCAATCAGCCCTTCTCACTGTGGAAGAACAGATAATAACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGGACAGGTAAGGAAATTTCTTGTTGAGTTACGTGCTTACTTAAAAACGAATAAACCTCAATTCCAAGAAATCATATCTTCTACCAAGACATTCACTCGGGAAGCATAA 1302 0.4094 MRKDAAEKNGTLLRSAGYVGSHNRKQRILKTIRNSEELREWAIEQLEKARARLRKVEMEADRLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGQGEISASESRLIESPAPDIISRRSVYEPLQTGLIAIDSMIPIGHAIGQKASSVAQVVTILQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDPSKQAQAYRQMSLLLRRPSGREAYLGDVFYLHSRFLERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFTELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSALLTVEEQIITIYTGTNGYLDSLEIGQVRKFLVELRAYLKTNKPQFQEIISSTKTFTREA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2528 433 CDD ATP-synt_F1_alpha_C 323 430 IPR000793 GO:0015986
Bisa08g2528 433 Coils Coil 32 66 - -
Bisa08g2528 433 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 320 432 - -
Bisa08g2528 433 FunFam ATP synthase subunit alpha, mitochondrial 144 319 - -
Bisa08g2528 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 318 IPR027417 -
Bisa08g2528 433 ProSitePatterns ATP synthase alpha and beta subunits signature. 303 312 IPR020003 GO:0005524
Bisa08g2528 433 FunFam ATP synthase subunit alpha 320 433 - -
Bisa08g2528 433 Gene3D - 21 144 - -
Bisa08g2528 433 Gene3D - 145 319 IPR027417 -
Bisa08g2528 433 Pfam ATP synthase alpha/beta chain, C terminal domain 319 432 IPR000793 GO:0015986
Bisa08g2528 433 Gene3D - 320 433 IPR038376 -
Bisa08g2528 433 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 145 432 IPR005294 GO:0015986|GO:0045261|GO:0046933
Bisa08g2528 433 CDD F1-ATPase_alpha_CD 77 315 IPR033732 GO:0032559
Bisa08g2528 433 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 141 312 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2528 Bisa-ChrBisa08 59527381 59531351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2528 50 323 Primary Pumps ATPases(2) AT1G76030 26.946 2.62e-19 88.2