Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa08g2518 ATGTCGTCAACGACGTGGTCTCAAGCTTTTTTGTTGGATCAGGAGTATCAGCAGGATCAGTTGGGGATGCTTGGCTTCCCACTAAACCTGAGCTTCAATTTCAATATGATCCCTCCTTTCTCTAATTATCCTCAATACTCTTTGAAAGCCTTAAGTGGCTTAGCTTCAGCTTCATCACTTGCAGCATCTGAAGCAGCTTCTCCTTCTTCTCCTATCACTACTTCACATCAACTCCTTTCCTTGAATACATCCACTATCAATCCATGGGAATGGGGAGAAGAGTGTGGGAGGAGAAAGAGAGAGGAAGAGAATGAAGGTGAGAAAAATGCAGGGGCTTCGGCGATGAAGATGAAGAGAACGTTAATGAAGAGAAGAAGAAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATGTTGATGTCTTGGACGATGGCTATAAATGGCGCAAGTATGGCCAGAAAGTCGTCAAGAACACCCACCATCCCAGGAGTTACTATCGTTGCACACAAGATAACTGTAGAGTGAAGAAACGAGTGGAGCGATTAGCAGAGGATCCAAGAATGGTGATAACCACGTATGAAGGTAGGCATGTCCATTCTCCTTCAAGTGATCTCCAAGATCCACACACTCATCCTTCTCAGCTTTCCACTTTCTTCTGGTAG 669 0.4514 MSSTTWSQAFLLDQEYQQDQLGMLGFPLNLSFNFNMIPPFSNYPQYSLKALSGLASASSLAASEAASPSSPITTSHQLLSLNTSTINPWEWGEECGRRKREEENEGEKNAGASAMKMKRTLMKRRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTHHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSSDLQDPHTHPSQLSTFFW 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa08g2518 222 Gene3D WRKY domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa08g2518 222 SUPERFAMILY WRKY DNA-binding domain 136 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa08g2518 222 FunFam WRKY transcription factor 57 130 204 - -
Bisa08g2518 222 ProSiteProfiles WRKY domain profile. 139 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa08g2518 222 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 67 205 IPR044810 GO:0003700
Bisa08g2518 222 SMART WRKY_cls 144 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa08g2518 222 Pfam WRKY DNA -binding domain 145 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa08g2518 Bisa-ChrBisa08 59273353 59276408 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa08g2518 31 222 WRKY Transcription Factor Family AT4G39410 45.902 6.23e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa08g2518 WRKY 2.3e-24 CL0274